RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 LOXHD1Q8IVV2 1947 aa17.18■□□□□ 0.34
COL27A1-201ENST00000356083 A0A1W2PQ67 120 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 FAM153BP0C7A2 387 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 YAP1P46937 504 aaKnown RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 GALNT11Q8NCW6 608 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 RFX7Q2KHR2 1363 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TLR5O60602 858 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 CHRM5P08912 532 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 SLC39A8Q9C0K1 460 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 SLC6A15Q9H2J7 730 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 ACSS2Q9NR19 701 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF609O15014 1411 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 FKTNO75072 461 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 OR3A3P47888 321 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 OR3A2P47893 321 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 ITPK1Q13572 414 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 ARFRP1Q13795 201 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 KLHL26Q53HC5 615 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TMEM63BQ5T3F8 832 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 SYVN1Q86TM6 617 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 GPR180Q86V85 440 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 BEND7Q8N7W2 519 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 CYP2W1Q8TAV3 490 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 RIIAD1A6NNX1 92 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 CPTPQ5TA50 214 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 NAIF1Q69YI7 327 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TTI2Q6NXR4 508 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF627Q7L945 461 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 COQ8AQ8NI60 647 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TBX5Q99593 518 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TRBC1P01850 177 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 UBAP2LQ14157 1087 aaKnown RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 SLC15A2Q16348 729 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 C2orf27AQ580R0 203 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 DENND5AQ6IQ26 1287 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 KIAA0319LQ8IZA0 1049 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 OR10H4Q8NGA5 316 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 PHPT1Q9NRX4 125 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 IQSEC2Q5JU85 1478 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 SAP18O00422 153 aaKnown RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 LRIG2O94898 1065 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 EFNA1P20827 205 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 RGS19P49795 217 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 HPF1Q9NWY4 346 aa17.17■□□□□ 0.34
COL27A1-201ENST00000356083 TPRP12270 2363 aaKnown RBP17.17■□□□□ 0.34
COL27A1-201ENST00000356083 KHNYNO15037 678 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 AKAP3O75969 853 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 BROXQ5VW32 411 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 FAM35AQ86V20 835 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 MCOLN2Q8IZK6 566 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 PPP3R2Q96LZ3 170 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 KIAA0100Q14667 2235 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 OR2AG2A6NM03 316 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 HSPA12AO43301 675 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ITGB1P05556 798 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CASP5P51878 434 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 FBXO48Q5FWF7 155 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF571Q7Z3V5 609 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ARPINQ7Z6K5 226 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 SLC25A23Q9BV35 468 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 TMBIM4Q9HC24 238 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CFAP97Q9P2B7 532 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 DEC1Q9P2X7 70 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 PLEKHA6Q9Y2H5 1048 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 PMF1-BGLAPU3KQ54 211 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 NKAPQ8N5F7 415 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 APOPT1Q96IL0 206 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 IRF2BPLQ9H1B7 796 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 POLR3BQ9NW08 1133 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CCDC59Q9P031 241 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 NRCAMQ92823 1304 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 PPP1R3GB7ZBB8 358 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 MTHFRP42898 656 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 GRK6P43250 576 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 GPD2P43304 727 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 AVPR1BP47901 424 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CDKL4Q5MAI5 379 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 GALNT18Q6P9A2 607 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ECHDC2Q86YB7 292 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 SPERTQ8NA61 448 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CENPMQ9NSP4 180 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ETNK2Q9NVF9 386 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF878C9JN71 531 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 ATG13O75143 517 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 IQCHQ86VS3 1027 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 SIPA1Q96FS4 1042 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 SNTG1Q9NSN8 517 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 GDAP2Q9NXN4 497 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 GLS2Q9UI32 602 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 CAPN6Q9Y6Q1 641 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 OTCP00480 354 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 AMIGO2Q86SJ2 522 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 Q8N9G6 341 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 TCEAL3Q969E4 200 aa17.16■□□□□ 0.34
COL27A1-201ENST00000356083 DUS2Q9NX74 493 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 AGO1Q9UL18 857 aaKnown RBP17.16■□□□□ 0.34
COL27A1-201ENST00000356083 DGKBQ9Y6T7 804 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms