RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 IRF9Q00978 393 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 ZNF284Q2VY69 593 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 PLD6Q8N2A8 252 aaKnown RBP15.48■□□□□ 0.07
CTSA-202ENST00000354880 TRAM1L1Q8N609 369 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 GDAP1Q8TB36 358 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 DTD2Q96FN9 168 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 RIOK2Q9BVS4 552 aaKnown RBP15.48■□□□□ 0.07
CTSA-202ENST00000354880 CLPBQ9H078 707 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 ABCG8Q9H221 673 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 P2RY12Q9H244 342 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 GPAMQ9HCL2 828 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 THEGQ9P2T0 379 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 SERGEFQ9UGK8 458 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 SCML1Q9UN30 329 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 COQ6Q9Y2Z9 468 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 COMMD10Q9Y6G5 202 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 PLXNB3Q9ULL4 1909 aa15.48■□□□□ 0.07
CTSA-202ENST00000354880 A0A087X1B8 175 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TSPAN6O43657 245 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 LZTS3O60299 673 aaPredicted RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 RECQL5O94762 991 aaPredicted RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 COL6A2P12110 1019 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TAS2R38P59533 333 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 IL9RQ01113 521 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 CREB5Q02930 508 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 ITIH4Q14624 930 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 CTSL3PQ5NE16 218 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 N4BP2L1Q5TBK1 243 aaPredicted RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 KYAT3Q6YP21 454 aaKnown RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 CCDC91Q7Z6B0 441 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 LCA5Q86VQ0 697 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 AP2M1Q96CW1 435 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 BOCQ9BWV1 1114 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 C1QTNF1Q9BXJ1 281 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 SLC6A17Q9H1V8 727 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 ZNF358Q9NW07 568 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 SMOXQ9NWM0 555 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 FBXL12Q9NXK8 326 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TAS2R13Q9NYV9 303 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 WNT16Q9UBV4 365 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 PCDHB1Q9Y5F3 818 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 RHOBTB1O94844 696 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 DHRS4L1P0CG22 281 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 CHRNB1P11230 501 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 RPS3P23396 243 aaKnown RBP eCLIP15.47■□□□□ 0.078e-9■■□□□ 12
CTSA-202ENST00000354880 LSP1P33241 339 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TIAL1Q01085 375 aaKnown RBP eCLIP15.47■□□□□ 0.07
CTSA-202ENST00000354880 ZBTB16Q05516 673 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TTC31Q49AM3 519 aaPredicted RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 TMEM92Q6UXU6 159 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TBC1D1Q86TI0 1168 aaPredicted RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 PIM3Q86V86 326 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 CENPLQ8N0S6 344 aaPredicted RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 GANCQ8TET4 914 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 FAM131CQ96AQ9 280 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 SIPA1Q96FS4 1042 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 TSNARE1Q96NA8 513 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 COPS8Q99627 209 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 POPDC3Q9HBV1 291 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 ZDHHC3Q9NYG2 299 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 PSD3Q9NYI0 1048 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 FBXL21Q9UKT6 434 aa15.47■□□□□ 0.07
CTSA-202ENST00000354880 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
CTSA-202ENST00000354880 DNAJC6O75061 913 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 PCDH8O95206 1070 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 C7P10643 843 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 CD9P21926 228 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 NSG1P42857 185 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 PDAP1Q13442 181 aaKnown RBP15.46■□□□□ 0.07
CTSA-202ENST00000354880 CRY1Q16526 586 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 SETMARQ53H47 684 aaPredicted RBP15.46■□□□□ 0.07
CTSA-202ENST00000354880 C16orf46Q6P387 395 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 ZNF765Q7L2R6 523 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 ZNF687Q8N1G0 1237 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 ARMC2Q8NEN0 867 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 KCTD4Q8WVF5 259 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 CKAP2Q8WWK9 683 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 KCNJ9Q92806 393 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 NUS1Q96E22 293 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 CCDC97Q96F63 343 aaPredicted RBP15.46■□□□□ 0.07
CTSA-202ENST00000354880 MRGPRX1Q96LB2 322 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 CCDC134Q9H6E4 229 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 TMEM216Q9P0N5 145 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 GNPTGQ9UJJ9 305 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 TMPRSS11EQ9UL52 423 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 EMCNQ9ULC0 261 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 MED16Q9Y2X0 877 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 TRPM6Q9BX84 2022 aa15.46■□□□□ 0.07
CTSA-202ENST00000354880 IGLV3-16A0A075B6K0 115 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 KRBA1A5PL33 1030 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 PLIN3O60664 434 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 VPS26AO75436 327 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 KLHL2O95198 593 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 WISP3O95389 354 aaPredicted RBP15.45■□□□□ 0.06
CTSA-202ENST00000354880 PYGLP06737 847 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 ACADMP11310 421 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 SLC26A3P40879 764 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 CCDC153Q494R4 210 aa15.45■□□□□ 0.06
CTSA-202ENST00000354880 GPRC6AQ5T6X5 926 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms