RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 TCF15Q12870 199 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 SLC29A2Q14542 456 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 LPAL2Q16609 132 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 ZNF470Q6ECI4 717 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 KYAT3Q6YP21 454 aaKnown RBP24.04■■□□□ 1.44
HMGA2-201ENST00000354636 CERS6Q6ZMG9 384 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 TAS2R42Q7RTR8 314 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 CILP2Q8IUL8 1156 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 FAM174AQ8TBP5 190 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 UBLCP1Q8WVY7 318 aaPredicted RBP24.04■■□□□ 1.44
HMGA2-201ENST00000354636 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.04■■□□□ 1.443e-7■■■■■ 66.7
HMGA2-201ENST00000354636 FUBP1Q96AE4 644 aaKnown RBP24.04■■□□□ 1.44
HMGA2-201ENST00000354636 HIC2Q96JB3 615 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 LGR4Q9BXB1 951 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 VPS13AQ96RL7 3174 aa24.04■■□□□ 1.44
HMGA2-201ENST00000354636 TNRC6BQ9UPQ9 1833 aaKnown RBP24.04■■□□□ 1.44
HMGA2-201ENST00000354636 UQCRHLA0A096LP55 91 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 TOR1BO14657 336 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 SLC25A14O95258 325 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 UQCRHP07919 91 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 HOXC4P09017 264 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 OGNP20774 298 aaKnown RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 HSD17B3P37058 310 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 YPEL5P62699 121 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 CTBP1Q13363 440 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 TYSND1Q2T9J0 566 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 AARS2Q5JTZ9 985 aaKnown RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 GPRC6AQ5T6X5 926 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 SDCCAG8Q86SQ7 713 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 LDB1Q86U70 411 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 PHYKPLQ8IUZ5 450 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 DENND6AQ8IWF6 608 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 DDHD1Q8NEL9 900 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 GABPB2Q8TAK5 448 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 SCG3Q8WXD2 468 aaKnown RBP24.03■■□□□ 1.44
HMGA2-201ENST00000354636 ACSS3Q9H6R3 686 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 TM9SF3Q9HD45 589 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 ZFATQ9P243 1243 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 RAB23Q9ULC3 237 aa24.03■■□□□ 1.44
HMGA2-201ENST00000354636 SPAG17Q6Q759 2223 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 A0A087WUV0 522 aaPredicted RBP24.02■■□□□ 1.44
HMGA2-201ENST00000354636 A6NNZ2 444 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 CXorf49A8MYA2 514 aaPredicted RBP24.02■■□□□ 1.44
HMGA2-201ENST00000354636 PIAS1O75925 651 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 TTPAP49638 278 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 DBN1Q16643 649 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 KBTBD12Q3ZCT8 623 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 BEND6Q5SZJ8 279 aaPredicted RBP24.02■■□□□ 1.44
HMGA2-201ENST00000354636 LYPLAL1Q5VWZ2 237 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 OTUD6BQ8N6M0 293 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 UHMK1Q8TAS1 419 aaKnown RBP24.02■■□□□ 1.44
HMGA2-201ENST00000354636 CDKL2Q92772 493 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 TCF12Q99081 682 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 PHPT1Q9NRX4 125 aaPredicted RBP24.02■■□□□ 1.44
HMGA2-201ENST00000354636 FBXO5Q9UKT4 447 aa24.02■■□□□ 1.44
HMGA2-201ENST00000354636 IGLV3-16A0A075B6K0 115 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 A0A1W2PR77 199 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 MYCLP1P12525 358 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-201ENST00000354636 H2AFXP16104 143 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-201ENST00000354636 SLC1A2P43004 574 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 RABIFP47224 123 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 LDLRAP1Q5SW96 308 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 Q6ZSR6 202 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 MFSD2AQ8NA29 543 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 C2CD4AQ8NCU7 369 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-201ENST00000354636 OR13H1Q8NG92 308 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 TTC1Q99614 292 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 ZDHHC3Q9NYG2 299 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 SLC17A6Q9P2U8 582 aa24.01■■□□□ 1.43
HMGA2-201ENST00000354636 OAS3Q9Y6K5 1087 aaKnown RBP24.01■■□□□ 1.43
HMGA2-201ENST00000354636 ATXN2Q99700 1313 aaKnown RBP24.01■■□□□ 1.43
HMGA2-201ENST00000354636 CD38P28907 300 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 PMLP29590 882 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 PPARGP37231 505 aaPredicted RBP24■■□□□ 1.43
HMGA2-201ENST00000354636 ITIH4Q14624 930 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 KHDC1Q4VXA5 237 aaKnown RBP24■■□□□ 1.43
HMGA2-201ENST00000354636 KIAA0408Q6ZU52 694 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 TRIM74Q86UV6 250 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 IQCHQ86VS3 1027 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 GDAP1Q8TB36 358 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 ATOH1Q92858 354 aaPredicted RBP24■■□□□ 1.43
HMGA2-201ENST00000354636 CYTH2Q99418 400 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 COPS8Q99627 209 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 IRF2BPLQ9H1B7 796 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 TRIM39Q9HCM9 518 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 ARFGAP3Q9NP61 516 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 GPR27Q9NS67 375 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 PILRBQ9UKJ0 227 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 CACNB4O00305 520 aaPredicted RBP24■■□□□ 1.43
HMGA2-201ENST00000354636 BCAT2O15382 392 aaPredicted RBP24■■□□□ 1.43
HMGA2-201ENST00000354636 MTX2O75431 263 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 S1PR4O95977 384 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 WNT1P04628 370 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 KIAA1024LP59773 190 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 OVGP1Q12889 678 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 SLC26A11Q86WA9 606 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 PIGKQ92643 395 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 CCDC97Q96F63 343 aaPredicted RBP24■■□□□ 1.43
HMGA2-201ENST00000354636 TMEM74BQ9NUR3 256 aa24■■□□□ 1.43
HMGA2-201ENST00000354636 INTS10Q9NVR2 710 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms