RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 GEN1Q17RS7 908 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 RABL3Q5HYI8 236 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 IQSEC1Q6DN90 963 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 FAM171BQ6P995 826 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 C8orf59Q8N0T1 100 aaPredicted RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 TEX26Q8N6G2 289 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 OR6P1Q8NGX9 317 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 DNAJB14Q8TBM8 379 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 S100ZQ8WXG8 99 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 VMP1Q96GC9 406 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF641Q96N77 438 aaPredicted RBP11.35□□□□□ -0.59
CAPN9-202ENST00000354537 DERL2Q9GZP9 239 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 SIK2Q9H0K1 926 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 ATXN3LQ9H3M9 355 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 SUN2Q9UH99 717 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 DSEQ9UL01 958 aa11.35□□□□□ -0.59
CAPN9-202ENST00000354537 SYCE1LA8MT33 242 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CLDN25C9JDP6 229 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 UPK1AO00322 258 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 KLK8O60259 260 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 MLYCDO95822 493 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 ALOX5P09917 674 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 LINC00032P0C843 101 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SMIM10L2AP0DMW4 78 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SMIM10L2BP0DMW5 78 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SMPD1P17405 629 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PAX3P23760 479 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 EEF1B2P24534 225 aaKnown RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CCR3P51677 355 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 ERVK-8P63133 956 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 TIAL1Q01085 375 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 OCA2Q04671 838 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PLCL1Q15111 1095 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 OR4D1Q15615 310 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PFKFB4Q16877 469 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 FAM98BQ52LJ0 330 aaKnown RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 GLYATQ6IB77 296 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 GALNT18Q6P9A2 607 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF549Q6P9A3 640 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 TBPL2Q6SJ96 375 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CPNE9Q8IYJ1 553 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 KIAA2013Q8IYS2 634 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SPARTQ8N0X7 666 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CHCHD4Q8N4Q1 142 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PJA1Q8NG27 643 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 OR52E4Q8NGH9 312 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 OR52K2Q8NGK3 314 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 FCRL2Q96LA5 508 aaPredicted RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CCDC115Q96NT0 180 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PSD2Q9BQI7 771 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 LHPPQ9H008 270 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 HMG20AQ9NP66 347 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 NAALAD2Q9Y3Q0 740 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 LDB2O43679 373 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SYNCRIPO60506 623 aaKnown RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SNAI1O95863 264 aaPredicted RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 ITIH1P19827 911 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CHRM3P20309 590 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 JAK1P23458 1154 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 HALP42357 657 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PCSK7Q16549 785 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PAGE3Q5JUK9 113 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 GALNT13Q8IUC8 556 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PARP8Q8N3A8 854 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 SVOPLQ8N434 492 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 PIK3C3Q8NEB9 887 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 FKBP10Q96AY3 582 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CCDC138Q96M89 665 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 ACBD6Q9BR61 282 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 AARSD1Q9BTE6 412 aaKnown RBP11.34□□□□□ -0.59
CAPN9-202ENST00000354537 UGT2B28Q9BY64 529 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 CORINQ9Y5Q5 1042 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 NUP205Q92621 2012 aa11.34□□□□□ -0.59
CAPN9-202ENST00000354537 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 E9PAM4 449 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MGEA5O60502 916 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 SNX2O60749 519 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 CRCPO75575 148 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 SIX3O95343 332 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 F2P00734 622 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 EPOP01588 193 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 EIF2S1P05198 315 aaKnown RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ANXA6P08133 673 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MMP2P08253 660 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 RABGGTBP53611 331 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 PLA2G16P53816 162 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 DIO3P55073 304 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MLLT6P55198 1093 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ADAM17P78536 824 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 TRIM16LQ309B1 348 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms