RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 C2orf73Q8N5S3 287 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 FNDC5Q8NAU1 212 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 C2CD4AQ8NCU7 369 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 CLHC1Q8NHS4 586 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 EME1Q96AY2 570 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 IMP4Q96G21 291 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ANKRD27Q96NW4 1050 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 MAGEH1Q9H213 219 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 VCX3BQ9H321 246 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 STN1Q9H668 368 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SYTL2Q9HCH5 934 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TREX1Q9NSU2 369 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 GALPQ9UBC7 116 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 MRPS23Q9Y3D9 190 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TRAF6Q9Y4K3 522 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 INSL5Q9Y5Q6 135 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 RNF103-CHMP3A0A140T963 221 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 OR2AG2A6NM03 316 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 SMAD6O43541 496 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 TIPRLO75663 272 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 ADH1AP07327 375 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 CNPP09543 421 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 NRG1Q02297 640 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 CPSF6Q16630 551 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 TRIM71Q2Q1W2 868 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 PIGGQ5H8A4 983 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 KIAA0930Q6ICG6 404 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 C16orf89Q6UX73 402 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 C7orf61Q8IZ16 206 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 RP9Q8TA86 221 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 BRSK1Q8TDC3 778 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 ISL2Q96A47 359 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 ZFYVE19Q96K21 471 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 TSEN34Q9BSV6 310 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 DDX18Q9NVP1 670 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 AP4B1Q9Y6B7 739 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 MIA3Q5JRA6 1907 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 ARHGAP10A1A4S6 786 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 H3BMM5 538 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 PSMD12O00232 456 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 FBP2O00757 339 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 FAM163BP0C2L3 166 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 PRDX3P30048 256 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 RGS4P49798 205 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 AGTR2P50052 363 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 SLC7A2P52569 658 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 GRB7Q14451 532 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 CNPY1Q3B7I2 92 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 TECRLQ5HYJ1 363 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 IL27RAQ6UWB1 636 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 Q6ZVU0 165 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 PIWIL4Q7Z3Z4 852 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 SZRD1Q7Z422 152 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 LRRC49Q8IUZ0 686 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 UMODL1-AS1Q8N2C9 162 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 HJURPQ8NCD3 748 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 CDK5RAP1Q96SZ6 601 aaKnown RBP10.33□□□□□ -0.76
SMPD4-201ENST00000351288 ZFYVE1Q9HBF4 777 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 VPS51Q9UID3 782 aa10.33□□□□□ -0.76
SMPD4-201ENST00000351288 MMP2P08253 660 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 HIST1H2AGP0C0S8 130 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 HIST1H2ADP20671 130 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 FAM45BPQ6NSW5 357 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 KDELC1Q6UW63 502 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 CILP2Q8IUL8 1156 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 FAM45AQ8TCE6 357 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 LPGAT1Q92604 370 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 VPS33AQ96AX1 596 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PYCR2Q96C36 320 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 HIST1H2AHQ96KK5 128 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 TSGA13Q96PP4 275 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 HIST1H2AJQ99878 128 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 H2AFJQ9BTM1 129 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 NOL11Q9H8H0 719 aaKnown RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ACTR8Q9H981 624 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 KLQ9UEF7 1012 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 EIF2B4Q9UI10 523 aaKnown RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ANKRD6Q9Y2G4 727 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SAC3D1A6NKF1 404 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 MRASO14807 208 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SYNCRIPO60506 623 aaKnown RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PRAMEF11O60813 436 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SLC25A14O95258 325 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 CLIC3O95833 236 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 IGSF6O95976 241 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 PEX11BO96011 259 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 CST5P28325 142 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 SH3BP2P78314 561 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 CBLBQ13191 982 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 AAK1Q2M2I8 961 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 TCTN1Q2MV58 587 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 CCSAPQ6IQ19 270 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ZNF549Q6P9A3 640 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 ZBTB46Q86UZ6 589 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 STAG3L4Q8TBR4 150 aa10.32□□□□□ -0.76
SMPD4-201ENST00000351288 MYO19Q96H55 970 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms