RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CLASP2O75122 1294 aaKnown RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF37AP17032 561 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 RAD51Q06609 339 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FLOT2Q14254 428 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 KIAA0408Q6ZU52 694 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 NET1Q7Z628 596 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 AFAP1L2Q8N4X5 818 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 KLHL23Q8NBE8 558 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF784Q8NCA9 323 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 NR1H4Q96RI1 486 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 GRIP2Q9C0E4 1043 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 EIF2B4Q9UI10 523 aaKnown RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ILVBLA1L0T0 632 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 RGSL1A5PLK6 1076 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 TARM1B6A8C7 271 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 PIP5K1BO14986 540 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 VCLP18206 1134 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 GDF5P43026 501 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 TSTA3Q13630 321 aaPredicted RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 ACAP2Q15057 778 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 SLC39A11Q8N1S5 342 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 ICA1LQ8NDH6 482 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 MCMBPQ9BTE3 642 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 EML4Q9HC35 981 aaKnown RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 SLCO3A1Q9UIG8 710 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 ADAMTS6Q9UKP5 1117 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 HIDE1A8MVS5 230 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 FFAR3O14843 346 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 GPR42O15529 346 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 CD1DP15813 335 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 PRKAA2P54646 552 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 MSLNQ13421 630 aaPredicted RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 RBM44Q6ZP01 1051 aaKnown RBP13.81□□□□□ -0.2
TRIM4-201ENST00000349062 DHDDSQ86SQ9 333 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 TMEM150AQ86TG1 271 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 FIBCD1Q8N539 461 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 RDH11Q8TC12 318 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 C17orf80Q9BSJ5 609 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 KLHL4Q9C0H6 718 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 SEMA6AQ9H2E6 1030 aa13.81□□□□□ -0.2
TRIM4-201ENST00000349062 SH3BGRLO75368 114 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 ECI2O75521 394 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 BAIAP3O94812 1187 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PRAMEF1O95521 474 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 UGT2B4P06133 528 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 COL6A2P12110 1019 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 BCL2L1Q07817 233 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 GRB7Q14451 532 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PDK3Q15120 406 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 GSTA3Q16772 222 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 MAP7D1Q3KQU3 841 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 UNC50Q53HI1 259 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 UGT3A1Q6NUS8 523 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 BNC2Q6ZN30 1099 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 TCF25Q9BQ70 676 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PAK6Q9NQU5 681 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 CXXC1Q9P0U4 656 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 CRLS1Q9UJA2 301 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 ASB1Q9Y576 335 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PSMD12O00232 456 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PEX1O43933 1283 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 VPS26AO75436 327 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 CA5AP35218 305 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 GGT5P36269 586 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 STX1BP61266 288 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 BHLHE22Q8NFJ8 381 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 TRIM43Q96BQ3 446 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 CDK5RAP1Q96SZ6 601 aaKnown RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 AARSD1Q9BTE6 412 aaKnown RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 TTLL2Q9BWV7 592 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 MRPL1Q9BYD6 325 aaKnown RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 CIPCQ9C0C6 399 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 LINC00597Q9H2U6 94 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 MMADHCQ9H3L0 296 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 TMEM165Q9HC07 324 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 S100A14Q9HCY8 104 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 NUP214P35658 2090 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 H2AFYO75367 372 aaKnown RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 PFKPQ01813 784 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 SMARCB1Q12824 385 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 VPS26BQ4G0F5 336 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 CMPK2Q5EBM0 449 aa13.8□□□□□ -0.2
TRIM4-201ENST00000349062 MRM3Q9HC36 420 aaKnown RBP13.8□□□□□ -0.2
TRIM4-201ENST00000349062 TRPC5OSA6NMA1 111 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 CAPN15O75808 1086 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 HGFP14210 728 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 PKMP14618 531 aaKnown RBP13.79□□□□□ -0.2
TRIM4-201ENST00000349062 GRIA2P42262 883 aa13.79□□□□□ -0.2
TRIM4-201ENST00000349062 LMAN2Q12907 356 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 911.2 ms