RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DNAAF2Q9NVR5 837 aaKnown RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 UROSP10746 265 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 LPOP22079 712 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 CHRNA5P30532 468 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 GTF2A2P52657 109 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 NIPAL1Q6NVV3 410 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SATL1Q86VE3 508 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SDR16C5Q8N3Y7 309 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SIPA1Q96FS4 1042 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 ZYG11BQ9C0D3 744 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 PCDHGB2Q9Y5G2 931 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SLC2A2P11168 524 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 DCST1Q5T197 706 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 KCTD8Q6ZWB6 473 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 ADAM32Q8TC27 787 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 EIF3KQ9UBQ5 218 aaKnown RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 ZMPSTE24O75844 475 aa19.27■□□□□ 0.67
HDAC4-201ENST00000345617 SHQ1Q6PI26 577 aaKnown RBP19.27■□□□□ 0.67
HDAC4-201ENST00000345617 CCDC28AQ8IWP9 274 aa19.27■□□□□ 0.67
HDAC4-201ENST00000345617 MARCH2Q9P0N8 246 aa19.27■□□□□ 0.67
HDAC4-201ENST00000345617 TAF1CQ15572 869 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 USP41Q3LFD5 358 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF517Q6ZMY9 492 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 RNF31Q96EP0 1072 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 TRNT1Q96Q11 434 aaKnown RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 KCNQ5Q9NR82 932 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 GPATCH2LQ9NWQ4 482 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 FABP12A6NFH5 140 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 LINC00032P0C843 101 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 CBR4Q8N4T8 237 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF420Q8TAQ5 688 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 SLC44A1Q8WWI5 657 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 HIPK3Q9H422 1215 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 PVALBP20472 110 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 MAB21L1Q13394 359 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 FBXL19Q6PCT2 694 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 DNAJB3Q8WWF6 145 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 HSFY1Q96LI6 401 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 TOP3BO95985 862 aaKnown RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 IGFALSP35858 605 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ABRQ12979 859 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ADAM15Q13444 863 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 EIPR1Q53HC9 387 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 TMEM165Q9HC07 324 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 PTPRHQ9HD43 1115 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ADGRB2O60241 1585 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 GNPDA1P46926 289 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 DPY19L1Q2PZI1 675 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 MTFMTQ96DP5 389 aaKnown RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 EPCAMP16422 314 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 AMPD1P23109 780 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 RXRBP28702 533 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 MFSD10Q14728 455 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 USP30Q70CQ3 517 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 COL26A1Q96A83 441 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 POLR3HQ9Y535 204 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 KDM4BO94953 1096 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 FRRS1Q6ZNA5 592 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 SLC9A9Q8IVB4 645 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ARMC10Q8N2F6 343 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ANKRD52Q8NB46 1076 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 CCDC86Q9H6F5 360 aaKnown RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF70Q9UC06 446 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-201ENST00000345617 PRR5-ARHGAP8B1AHC4 643 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ARHGAP8P85298 464 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 TIGD2Q4W5G0 525 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 SNX33Q8WV41 574 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 ASB8Q9H765 288 aa19.26■□□□□ 0.67
HDAC4-201ENST00000345617 CCDC54Q8NEL0 328 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 MAU2Q9Y6X3 613 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.675e-7■■■□□ 16.1
HDAC4-201ENST00000345617 GAL3ST3Q96A11 431 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 CPB2Q96IY4 423 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 FAM237AA0A1B0GTK4 181 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 CDKL1Q00532 357 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 ADGRE1Q14246 886 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF311Q5JNZ3 666 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 MAP4K3Q8IVH8 894 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 PRELID2Q8N945 189 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 OR4L1Q8NH43 312 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 TMX2Q9Y320 296 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 USP4Q13107 963 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 ZBED5Q49AG3 693 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 CES3Q6UWW8 571 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 BRD9Q9H8M2 597 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 DNMT3LQ9UJW3 386 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF99A8MXY4 864 aaPredicted RBP19.25■□□□□ 0.67
HDAC4-201ENST00000345617 PEX11AO75192 247 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 FSHRP23945 695 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 CEBPGP53567 150 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 DEFA5Q01523 94 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 TDRPQ86YL5 185 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 MAFIPQ8WZ33 124 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 KCTD7Q96MP8 289 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 NPAS2Q99743 824 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 PTBP2Q9UKA9 531 aaKnown RBP19.25■□□□□ 0.67
HDAC4-201ENST00000345617 E5RJQ4 531 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms