RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MYF5P13349 255 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CLDN6P56747 220 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 SHC2P98077 582 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CDH17Q12864 832 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 AGERQ15109 404 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 DNAJC21Q5F1R6 531 aaKnown RBP13.73□□□□□ -0.21
TPM4-202ENST00000344824 SIRPB2Q5JXA9 342 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CERCAMQ5T4B2 595 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 ESRP1Q6NXG1 681 aaKnown RBP13.73□□□□□ -0.21
TPM4-202ENST00000344824 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 EMBQ6PCB8 327 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CRTC1Q6UUV9 634 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CAPN12Q6ZSI9 719 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 Q6ZVL8 140 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
TPM4-202ENST00000344824 ZBED8Q8IZ13 594 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 BTN2A2Q8WVV5 523 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 ADAMTS14Q8WXS8 1223 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 FUBP1Q96AE4 644 aaKnown RBP13.73□□□□□ -0.21
TPM4-202ENST00000344824 DTD2Q96FN9 168 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 C9orf72Q96LT7 481 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 COQ10AQ96MF6 247 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 LRRC61Q9BV99 259 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 FRMD8Q9BZ67 464 aaPredicted RBP13.73□□□□□ -0.21
TPM4-202ENST00000344824 FOXP3Q9BZS1 431 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 SYBUQ9NX95 663 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CHMP2BQ9UQN3 213 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
TPM4-202ENST00000344824 CCDC78A2IDD5 438 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 PSMD11O00231 422 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 CLDN7O95471 211 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 NDST3O95803 873 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 ANXA6P08133 673 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 C1SP09871 688 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 PIRTP0C851 137 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 H2AFXP16104 143 aaPredicted RBP13.72□□□□□ -0.21
TPM4-202ENST00000344824 TSHRP16473 764 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 ELK3P41970 407 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 GPR1P46091 355 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 ACADVLP49748 655 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 BLKP51451 505 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 SRP54P61011 504 aaKnown RBP13.72□□□□□ -0.21
TPM4-202ENST00000344824 SEPT6Q14141 434 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 ALG11Q2TAA5 492 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 DENND5AQ6IQ26 1287 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 TMC3Q7Z5M5 1100 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 HEATR4Q86WZ0 1026 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 AGGF1Q8N302 714 aaeCLIP13.72□□□□□ -0.21
TPM4-202ENST00000344824 FBXO36Q8NEA4 188 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■■■■ 56.2
TPM4-202ENST00000344824 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 CFAP36Q96G28 342 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 ADGRE3Q9BY15 652 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 MRPL40Q9NQ50 206 aaKnown RBP13.72□□□□□ -0.21
TPM4-202ENST00000344824 PHPT1Q9NRX4 125 aaPredicted RBP13.72□□□□□ -0.21
TPM4-202ENST00000344824 NLGN3Q9NZ94 848 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 ASXL3Q9C0F0 2248 aa13.72□□□□□ -0.21
TPM4-202ENST00000344824 LOC285095A0A1B0GVY8 99 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 FAM149AA5PLN7 773 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 TMEM202A6NGA9 273 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 DYNC1I1O14576 645 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 PRLP01236 227 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 CELA2BP08218 269 aaPredicted RBP13.71□□□□□ -0.22
TPM4-202ENST00000344824 MLNP12872 115 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 ZNF30P17039 623 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 CKMT2P17540 419 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 HLA-DPA1P20036 260 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 KELP23276 732 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 MAGEA4P43358 317 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 HK3P52790 923 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 PMS2P54278 862 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 KIAA1024LP59773 190 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 POU6F1Q14863 301 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 SLMAPQ14BN4 828 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 SLC14A2Q15849 920 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 QPCTQ16769 361 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 PROX2Q3B8N5 592 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 CCDC38Q502W7 563 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 UBAP2Q5T6F2 1119 aaKnown RBP13.71□□□□□ -0.22
TPM4-202ENST00000344824 PNCKQ6P2M8 343 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 RANBP10Q6VN20 620 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 CEP128Q6ZU80 1094 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 IGDCC3Q8IVU1 814 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 OR56A4Q8NGH8 313 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 UBLCP1Q8WVY7 318 aaPredicted RBP13.71□□□□□ -0.22
TPM4-202ENST00000344824 CAVIN3Q969G5 261 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 AP2M1Q96CW1 435 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 APOLD1Q96LR9 279 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 TRIB3Q96RU7 358 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 WDR83Q9BRX9 315 aaKnown RBP13.71□□□□□ -0.22
TPM4-202ENST00000344824 TRIM56Q9BRZ2 755 aaKnown RBP13.71□□□□□ -0.22
TPM4-202ENST00000344824 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 LGR4Q9BXB1 951 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.22
TPM4-202ENST00000344824 CDC42EP4Q9H3Q1 356 aaKnown RBP13.71□□□□□ -0.22
TPM4-202ENST00000344824 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms