RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ALS2CLQ60I27 953 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 SLC9A4Q6AI14 798 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 TMEM71Q6P5X7 295 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 MFSD7Q6UXD7 560 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 BZW1Q7L1Q6 419 aaKnown RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 CHST15Q7LFX5 561 aaPredicted RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 LYSMD3Q7Z3D4 306 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 CNTD1Q8N815 330 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 AHCYL2Q96HN2 611 aaKnown RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 SPATA16Q9BXB7 569 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 GPR63Q9BZJ6 419 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 SEMA6CQ9H3T2 930 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 RMI1Q9H9A7 625 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 ARFGAP3Q9NP61 516 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 GEMIN8Q9NWZ8 242 aaKnown RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 INTUQ9ULD6 942 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 ST14Q9Y5Y6 855 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 OAS3Q9Y6K5 1087 aaKnown RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 RGSL1A5PLK6 1076 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 PPM1DO15297 605 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 PMPCBO75439 489 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 CD1CP29017 333 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 NFATC3Q12968 1075 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 SPA17Q15506 151 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 DCAF12Q5T6F0 453 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 TMPRSS9Q7Z410 1059 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 ZNF761Q86XN6 746 aaPredicted RBP12.3□□□□□ -0.44
SGCA-202ENST00000344627 CCDC50Q8IVM0 306 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 NAGSQ8N159 534 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 EXD3Q8N9H8 876 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 OR10G6Q8NH81 332 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 SPATA22Q8NHS9 363 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 TFB1MQ8WVM0 346 aaKnown RBP12.3□□□□□ -0.44
SGCA-202ENST00000344627 IMP4Q96G21 291 aaKnown RBP12.3□□□□□ -0.44
SGCA-202ENST00000344627 COX14Q96I36 57 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 LYSMD1Q96S90 227 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 SLC38A3Q99624 504 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 NUDT22Q9BRQ3 303 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.3□□□□□ -0.44
SGCA-202ENST00000344627 BRD8Q9H0E9 1235 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 SLC25A18Q9H1K4 315 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 SLC25A51Q9H1U9 297 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 TRIT1Q9H3H1 467 aaKnown RBP12.3□□□□□ -0.44
SGCA-202ENST00000344627 ZFYVE1Q9HBF4 777 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 GLOD4Q9HC38 313 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 KCNK4Q9NYG8 393 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 UBP1Q9NZI7 540 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 VPS18Q9P253 973 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 PDP2Q9P2J9 529 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 SAE1Q9UBE0 346 aaPredicted RBP12.3□□□□□ -0.44
SGCA-202ENST00000344627 IL17BQ9UHF5 180 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 KCNK6Q9Y257 313 aa12.3□□□□□ -0.44
SGCA-202ENST00000344627 A0A0A6YYK5 440 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 IGHV5-10-1A0A0J9YXX1 117 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 FADS2P1A8MWK0 482 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 F5H423 210 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 SUV39H1O43463 412 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 DUX1O43812 170 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 CST8O60676 142 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 SLC25A14O95258 325 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 MT-CYBP00156 380 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 ACP5P13686 325 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 MPSTP25325 297 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 MAP4P27816 1152 aaKnown RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 ETV5P41161 510 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 EPHA4P54764 986 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 MC1RQ01726 317 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 CDK18Q07002 472 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 NFATC2Q13469 925 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 C16orf72Q14CZ0 275 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 TGIF1Q15583 401 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 CRTC2Q53ET0 693 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 TEX44Q53QW1 395 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 ZNF569Q5MCW4 686 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 SNAP47Q5SQN1 464 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 ZNF648Q5T619 568 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 HENMT1Q5T8I9 393 aaKnown RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 BORAQ6PGQ7 559 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 WDR74Q6RFH5 385 aaPredicted RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 SPOCD1Q6ZMY3 1216 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 PRICKLE2Q7Z3G6 844 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 IL22RA1Q8N6P7 574 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 RCBTB1Q8NDN9 531 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 EXTL1Q92935 676 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 HAUS1Q96CS2 278 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 WDR24Q96S15 920 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 OR2AG1Q9H205 316 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 CNOT6Q9ULM6 557 aaKnown RBP12.29□□□□□ -0.44
SGCA-202ENST00000344627 PCDHA13Q9Y5I0 950 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
SGCA-202ENST00000344627 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 IGHV1OR21-1A0A087WYE8 117 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 GPR89AB7ZAQ6 455 aa12.28□□□□□ -0.44
SGCA-202ENST00000344627 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
SGCA-202ENST00000344627 ARHGAP6O43182 974 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms