RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TALDO1P37837 337 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NPTX2P47972 431 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF143P52747 638 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NRLP54845 237 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 EEFSECP57772 596 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GPLD1P80108 840 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CXCL9Q07325 125 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 INCA1Q0VD86 236 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TBRG1Q3YBR2 411 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SPANXN2Q5MJ10 180 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CATSPEREQ5SY80 951 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TPRG1LQ5T0D9 272 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 FAM102BQ5T8I3 360 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SLFN12LQ6IEE8 588 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 FSTL4Q6MZW2 842 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PMF1Q6P1K2 205 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 STRADAQ7RTN6 431 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GLRX5Q86SX6 157 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 RETREG3Q86VR2 466 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ZDHHC13Q8IUH4 622 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 C4orf19Q8IY42 314 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PLD6Q8N2A8 252 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 AADATQ8N5Z0 425 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ARFGAP1Q8N6T3 406 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ANKRD53Q8N9V6 530 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GMCL1P1Q8NEA9 526 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PJA1Q8NG27 643 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SPPL2BQ8TCT7 592 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 BRSK1Q8TDC3 778 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 LGALS12Q96DT0 336 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GDF15Q99988 308 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 RBM4BQ9BQ04 359 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 C17orf62Q9BQA9 187 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NTPCRQ9BSD7 190 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TARS2Q9BW92 718 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 RBM4Q9BWF3 364 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 DPEP3Q9H4B8 488 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 DHX35Q9H5Z1 703 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 WDR6Q9NNW5 1121 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GTSE1Q9NYZ3 720 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 IL37Q9NZH6 218 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 HMGXB4Q9UGU5 601 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PCSK1NQ9UHG2 260 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TCEAL9Q9UHQ7 104 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ATP6V1HQ9UI12 483 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SLCO3A1Q9UIG8 710 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 MAGEL2Q9UJ55 1249 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TRMT6Q9UJA5 497 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PSAT1Q9Y617 370 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 HSPE1-MOB4S4R3N1 261 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 TCRBV5S2A0A599 114 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 KRT87PA6NCN2 255 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 PABPN1LA6NDY0 278 aaKnown RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 FAM25EA8MYX2 175 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 EFCAB9A8MZ26 197 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 B4GAT1O43505 415 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 TLL1O43897 1013 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF780AO75290 641 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 UGT2B17O75795 530 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 SLITRK5O94991 958 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 EPN2O95208 641 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 VNN1O95497 513 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 METTL18O95568 372 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 HTR1AP08908 422 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 FOSL1P15407 271 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 IL7RP16871 459 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 GPD1P21695 349 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 OXTRP30559 389 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 SLC26A3P40879 764 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 HNF4AP41235 474 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 CLK1P49759 484 aaKnown RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 UGT2B15P54855 530 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 MLLT6P55198 1093 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 CXCR4P61073 352 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 VBP1P61758 197 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 BAMBIQ13145 260 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 SEMA3BQ13214 749 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 GPR50Q13585 617 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 UGP2Q16851 508 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 COLEC12Q5KU26 742 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 LETMD1Q6P1Q0 360 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 GDPD3Q7L5L3 318 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 EMC1Q8N766 993 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 FLCNQ8NFG4 579 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 JOSD2Q8TAC2 188 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 BPIFB1Q8TDL5 484 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 MCRS1Q96EZ8 462 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 TMEM80Q96HE8 168 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 SPATA13Q96N96 652 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 TRMOQ9BU70 441 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 REXO4Q9GZR2 422 aaKnown RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 NXF2Q9GZY0 626 aaKnown RBP8.08□□□□□ -1.12
ATG4A-201ENST00000343524 C2orf40Q9H1Z8 148 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 DCSTAMPQ9H295 470 aa8.08□□□□□ -1.12
ATG4A-201ENST00000343524 R3HDMLQ9H3Y0 253 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms