RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 NUS1Q96E22 293 aa13.77□□□□□ -0.2
PMS1-201ENST00000342075 SMC6Q96SB8 1091 aa13.77□□□□□ -0.2
PMS1-201ENST00000342075 CYP8B1Q9UNU6 501 aa13.77□□□□□ -0.2
PMS1-201ENST00000342075 TBC1D3DA0A087WVF3 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3IA0A087WXS9 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3EA0A087X179 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3KA0A087X1G2 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3FA6NER0 549 aaPredicted RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3LB9A6J9 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 RAD51BO15315 384 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TYROBPO43914 113 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 PCCBP05166 539 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3HP0C7X1 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 SLC35E2BP0CK96 405 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 CHN1P15882 459 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 GLRBP48167 497 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 SERPINB9P50453 376 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 DLG1Q12959 904 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 MTAPQ13126 283 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 SETMARQ53H47 684 aaPredicted RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3GQ6DHY5 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3CQ6IPX1 549 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 RAPH1Q70E73 1250 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TBC1D3Q8IZP1 549 aaPredicted RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 NXPE1Q8N323 547 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 PJA1Q8NG27 643 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 FAM76AQ8TAV0 307 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 TCP10LQ8TDR4 215 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 ANKRD49Q8WVL7 239 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 MSANTD3Q96H12 275 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 LENG8Q96PV6 779 aaPredicted RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 SARS2Q9NP81 518 aaKnown RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 FAM8A1Q9UBU6 413 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 APPL1Q9UKG1 709 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 A0A1W2PQU0 124 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 C2P06681 752 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 ACADMP11310 421 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 OGNP20774 298 aaKnown RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 TMEM52BQ4KMG9 183 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 GPRC6AQ5T6X5 926 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 RAET1GQ6H3X3 334 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 KIAA0408Q6ZU52 694 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 GIMAP7Q8NHV1 300 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 PLEKHG4BQ96PX9 1271 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 PPCSQ9HAB8 311 aa13.77□□□□□ -0.21
PMS1-201ENST00000342075 PCYT1BQ9Y5K3 369 aaPredicted RBP13.77□□□□□ -0.21
PMS1-201ENST00000342075 A0A096LPK6 155 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 TRBV5-4A0A0C4DH59 114 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 PLRG1O43660 514 aaKnown RBP13.76□□□□□ -0.21
PMS1-201ENST00000342075 DEFB119Q8N690 84 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 SIDT2Q8NBJ9 832 aaKnown RBP13.76□□□□□ -0.21
PMS1-201ENST00000342075 KCTD4Q8WVF5 259 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 SGF29Q96ES7 293 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 SRPK1Q96SB4 655 aaKnown RBP13.76□□□□□ -0.21
PMS1-201ENST00000342075 PAIP2Q9BPZ3 127 aaKnown RBP13.76□□□□□ -0.21
PMS1-201ENST00000342075 LGR4Q9BXB1 951 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 ACSS2Q9NR19 701 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 SLC31A1O15431 190 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 WSCD2Q2TBF2 565 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 SYT13Q7L8C5 426 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 CROCCP2Q86T23 111 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 FAM111AQ96PZ2 611 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 RABEP2Q9H5N1 569 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 NSMCE4AQ9NXX6 385 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 OR1A2Q9Y585 309 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 OAS3Q9Y6K5 1087 aaKnown RBP13.76□□□□□ -0.21
PMS1-201ENST00000342075 SLCO1B1Q9Y6L6 691 aa13.76□□□□□ -0.21
PMS1-201ENST00000342075 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 H0Y858 1186 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 ATP5DP30049 168 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TTPAP49638 278 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 SERPINB8P50452 374 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 LGSNQ5TDP6 509 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 CENPLQ8N0S6 344 aaPredicted RBP13.75□□□□□ -0.21
PMS1-201ENST00000342075 GPR21Q99679 349 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 MECRQ9BV79 373 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 P2RY12Q9H244 342 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 CNOT6Q9ULM6 557 aaKnown RBP13.75□□□□□ -0.21
PMS1-201ENST00000342075 VWA7Q9Y334 891 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 AGAP14A8MT82 685 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 H0Y8X5 98 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 SCAMP1O15126 338 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 RNGTTO60942 597 aaKnown RBP13.75□□□□□ -0.21
PMS1-201ENST00000342075 AKT1P31749 480 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 CSRP3P50461 194 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 WDR4P57081 412 aaKnown RBP13.75□□□□□ -0.21
PMS1-201ENST00000342075 SLC18A2Q05940 514 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TTC31Q49AM3 519 aaPredicted RBP13.75□□□□□ -0.21
PMS1-201ENST00000342075 ARMC3Q5W041 872 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TSSK4Q6SA08 328 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TAOK1Q7L7X3 1001 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 TSTD1Q8NFU3 115 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 MTBPQ96DY7 904 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 MOCOSQ96EN8 888 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
PMS1-201ENST00000342075 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
PMS1-201ENST00000342075 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms