RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 TMIGD2Q96BF3 282 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 SUSD3Q96L08 255 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 C2orf49Q9BVC5 232 aaPredicted RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ZNF556Q9HAH1 456 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 AQP12BA6NM10 295 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TAF4O00268 1085 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 GUCA1CO95843 209 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 IFNA8P32881 189 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CHRNA4P43681 627 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 RABGGTBP53611 331 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 HERVK_113P63132 956 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CLCQ05315 142 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CLEC6AQ6EIG7 209 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CCDC81Q6ZN84 652 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 DCDC5Q6ZRR9 648 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ITIH5Q86UX2 942 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 AQP12AQ8IXF9 295 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CDYL2Q8N8U2 506 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 SCAMP5Q8TAC9 235 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 LINGO1Q96FE5 620 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 HEPHQ9BQS7 1158 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ADI1Q9BV57 179 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ERVK-6Q9BXR3 956 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CNOT11Q9UKZ1 510 aaKnown RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 PCDHB1Q9Y5F3 818 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 SORBS2O94875 1100 aaKnown RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TACR2P21452 398 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 S100A5P33763 92 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 GNA12Q03113 381 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TOP3AQ13472 1001 aaPredicted RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 OLIG2Q13516 323 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 PPM1LQ5SGD2 360 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TRNP1Q6NT89 227 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 DUS1LQ6P1R4 473 aaKnown RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TMEM26Q6ZUK4 368 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 C8orf59Q8N0T1 100 aaPredicted RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TAGAPQ8N103 731 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 NPLOC4Q8TAT6 608 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ZNF599Q96NL3 588 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 MOSPD1Q9UJG1 213 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 FAM72CH0Y354 149 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 SLC28A1O00337 649 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ARHGEF9O43307 516 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TSPAN3O60637 253 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 IGSF6O95976 241 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 GOT2P00505 430 aaKnown RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 AMHP03971 560 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CKMP06732 381 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CCDC159P0C7I6 412 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CLK1P49759 484 aaKnown RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 GSTM4Q03013 218 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 LRRC74AQ0VAA2 488 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ZBTB6Q15916 424 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 FAM72AQ5TYM5 149 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 FAM72DQ6L9T8 149 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 MSANTD2Q6P1R3 559 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 KCTD8Q6ZWB6 473 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
TRAK1-202ENST00000341421 FAM72BQ86X60 149 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 TTC30BQ8N4P2 665 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 FAM156AQ8NDB6 213 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 OR9Q1Q8NGQ5 310 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 PSMG2Q969U7 264 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ERLEC1Q96DZ1 483 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 MTMR10Q9NXD2 777 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 EGFL7Q9UHF1 273 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 GTF2IRD1Q9UHL9 959 aa11.66□□□□□ -0.54
TRAK1-202ENST00000341421 ZNF701M0R085 212 aaPredicted RBP11.65□□□□□ -0.54
TRAK1-202ENST00000341421 OR4Q2P0C623 313 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 UROSP10746 265 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 MC4RP32245 332 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 S100A3P33764 101 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 MAGEA3P43357 314 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 TPTEP56180 551 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 MAPKAPK3Q16644 382 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 PAOXQ6QHF9 649 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 CERS6Q6ZMG9 384 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 OR4K2Q8NGD2 314 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 PNPT1Q8TCS8 783 aaKnown RBP11.65□□□□□ -0.54
TRAK1-202ENST00000341421 RAB2BQ8WUD1 216 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 EBF1Q9UH73 591 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
TRAK1-202ENST00000341421 EOMESO95936 686 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 URODP06132 367 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 ATP6V1E1P36543 226 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 ADAM17P78536 824 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 GPR180Q86V85 440 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 STARD8Q92502 1023 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 TRIM63Q969Q1 353 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 CENPNQ96H22 339 aaPredicted RBP11.65□□□□□ -0.54
TRAK1-202ENST00000341421 EXOSC4Q9NPD3 245 aaKnown RBP11.65□□□□□ -0.54
TRAK1-202ENST00000341421 INVSQ9Y283 1065 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 NEMP2A6NFY4 417 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 MFN2O95140 757 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 ANXA5P08758 320 aa11.65□□□□□ -0.54
TRAK1-202ENST00000341421 OR56A5P0C7T3 313 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms