RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 PURAQ00577 322 aaKnown RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 ZNF181Q2M3W8 571 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 ADPRMQ3LIE5 342 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 MROH9Q5TGP6 573 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 TNS4Q8IZW8 715 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 LINC00518Q8N0U6 118 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 LRRC20Q8TCA0 184 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PHF10Q8WUB8 498 aaKnown RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 ANKRD49Q8WVL7 239 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 ASIC4Q96FT7 647 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 DSN1Q9H410 356 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 DIABLOQ9NR28 239 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 SAE1Q9UBE0 346 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 CACNG4Q9UBN1 327 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PCSK1NQ9UHG2 260 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 C17orf102A2RUQ5 167 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 H0Y858 1186 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PI15O43692 258 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 SSX4O60224 188 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 BMP1P13497 986 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 IGFBP6P24592 240 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 PSMD8P48556 350 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 ATP6AP1Q15904 470 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 KYAT1Q16773 422 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 VN1R5Q7Z5H4 357 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 METTL3Q86U44 580 aaKnown RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 UBQLNLQ8IYU4 475 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 BCL7CQ8WUZ0 217 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 CANT1Q8WVQ1 401 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 SOCS4Q8WXH5 440 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 APBB2Q92870 758 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 WDR55Q9H6Y2 383 aaPredicted RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 CYP3A43Q9HB55 503 aa11.8□□□□□ -0.52
RTN3-203ENST00000341307 WBP11Q9Y2W2 641 aaKnown RBP11.8□□□□□ -0.52
RTN3-203ENST00000341307 TCAF2A6NFQ2 919 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 MEIS3P2A8K0S8 358 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 A8MUA0 341 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 LINC01387J3KSC0 135 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 TRIM24O15164 1050 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 PLIN3O60664 434 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 LRCH4O75427 683 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 TADA2AO75478 443 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 PFKMP08237 780 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 HTR1AP08908 422 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 IFI30P13284 250 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 GARSP41250 739 aaKnown RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 DYNLT1P63172 113 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 IL1RL1Q01638 556 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SOX4Q06945 474 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 INCA1Q0VD86 236 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 PIGHQ14442 188 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 CBX2Q14781 532 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 ZBTB6Q15916 424 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 DGUOKQ16854 277 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 ZNF600Q6ZNG1 722 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 NLGN4XQ8N0W4 816 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 METTL4Q8N3J2 472 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 DHRSXQ8N5I4 330 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 CCDC185Q8N715 623 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SLC2A14Q8TDB8 520 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 KCTD14Q9BQ13 255 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 USB1Q9BQ65 265 aaKnown RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 DGCR6LQ9BY27 220 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 FBXL12Q9NXK8 326 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 TNFRSF10DQ9UBN6 386 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SMIM28A0A1B0GU29 152 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SEMA3DO95025 777 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SEC24AO95486 1093 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 AXLP30530 894 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 OR2B6P58173 313 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 PSME3P61289 254 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 MPP1Q00013 466 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 DPY19L1Q2PZI1 675 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 GOLGA7BQ2TAP0 167 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 UBXN11Q5T124 520 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 FAM102AQ5T9C2 384 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 LGSNQ5TDP6 509 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 IRAK1BP1Q5VVH5 260 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 TRNP1Q6NT89 227 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 ALKAL1Q6UXT8 129 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SPRED1Q7Z699 444 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 ADCK1Q86TW2 530 aa11.79□□□□□ -0.52
RTN3-203ENST00000341307 SAMD14Q8IZD0 417 aaPredicted RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 PCDH20Q8N6Y1 951 aaKnown RBP11.79□□□□□ -0.52
RTN3-203ENST00000341307 GALNT11Q8NCW6 608 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms