RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 SFRP1Q8N474 314 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 FBXO39Q8N4B4 442 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 ALG3Q92685 438 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 FCRL3Q96P31 734 aaPredicted RBP16.88■□□□□ 0.29
BRCC3-202ENST00000340647 FCRL5Q96RD9 977 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 UBL7Q96S82 380 aaPredicted RBP16.88■□□□□ 0.29
BRCC3-202ENST00000340647 CDH19Q9H159 772 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 TMEM9Q9P0T7 183 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 SLC23A2Q9UGH3 650 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 ZNHIT2Q9UHR6 403 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 PCDHA3Q9Y5H8 950 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 IGHV1OR21-1A0A087WYE8 117 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 IGHV5-10-1A0A0J9YXX1 117 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 GRID2IPA4D2P6 1211 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 BTNL10A8MVZ5 291 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 GAPDHSO14556 408 aaPredicted RBP16.87■□□□□ 0.29
BRCC3-202ENST00000340647 PJA2O43164 708 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 ASMTLO95671 621 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 RBMS1P29558 406 aaKnown RBP16.87■□□□□ 0.29
BRCC3-202ENST00000340647 ALDH4A1P30038 563 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 SLC5A2P31639 672 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 CYLC1P35663 651 aaPredicted RBP16.87■□□□□ 0.29
BRCC3-202ENST00000340647 MLLT3P42568 568 aaPredicted RBP16.87■□□□□ 0.29
BRCC3-202ENST00000340647 FASLGP48023 281 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 SRSF6Q13247 344 aaKnown RBP16.87■□□□□ 0.29
BRCC3-202ENST00000340647 SQSTM1Q13501 440 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 SPA17Q15506 151 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 AMZ1Q400G9 498 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 SIRPB2Q5JXA9 342 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 CHST15Q7LFX5 561 aaPredicted RBP16.87■□□□□ 0.29
BRCC3-202ENST00000340647 ADGRG6Q86SQ4 1221 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 DAAM2Q86T65 1068 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 TMTC1Q8IUR5 882 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 ZNF547Q8IVP9 402 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 CCHCR1Q8TD31 782 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 KCNE4Q8WWG9 221 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 HTR3CQ8WXA8 447 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 P3H4Q92791 437 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 PMEPA1Q969W9 287 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 TMEM74Q96NL1 305 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 FAM153AQ9UHL3 310 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 KCNK6Q9Y257 313 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 LOXL2Q9Y4K0 774 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 PCDHGA7Q9Y5G6 932 aa16.87■□□□□ 0.29
BRCC3-202ENST00000340647 CHUKO15111 745 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 GPR39O43194 453 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 KLK10O43240 276 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 CPNE6O95741 557 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 CCL4P13236 92 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 CTNNA2P26232 953 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 RBL1P28749 1068 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 GPR3P46089 330 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 EIF3IQ13347 325 aaKnown RBP16.86■□□□□ 0.29
BRCC3-202ENST00000340647 MSLNQ13421 630 aaPredicted RBP16.86■□□□□ 0.29
BRCC3-202ENST00000340647 OLIG2Q13516 323 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 LRP8Q14114 963 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 TGIF1Q15583 401 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 IYDQ6PHW0 289 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 TRAM1L1Q8N609 369 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 SNRNP27Q8WVK2 155 aaKnown RBP16.86■□□□□ 0.29
BRCC3-202ENST00000340647 SLC39A7Q92504 469 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 SPATA16Q9BXB7 569 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 DPH1Q9BZG8 443 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 OR2AG1Q9H205 316 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 CARD9Q9H257 536 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 TRIM39Q9HCM9 518 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 BPIFA1Q9NP55 256 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 SCHIP1Q9P0W5 487 aaPredicted RBP16.86■□□□□ 0.29
BRCC3-202ENST00000340647 TRIM10Q9UDY6 481 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 ACSL6Q9UKU0 697 aa16.86■□□□□ 0.29
BRCC3-202ENST00000340647 RHPN2P1A8MT19 583 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 C9orf172C9J069 976 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 TMX2-CTNND1H3BSU7 103 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 APOC4-APOC2K7ER74 178 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 GRID2O43424 1007 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 MTX2O75431 263 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 EPOP01588 193 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 APOC2P02655 101 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 SLC4A1P02730 911 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 PYGMP11217 842 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 ACP5P13686 325 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 PTPN7P35236 360 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 HMGCLP35914 325 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 CXADRP78310 365 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 PTPRCAPQ14761 206 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 SLC1A5Q15758 541 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 ATP13A5Q4VNC0 1218 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 BZW1Q7L1Q6 419 aaKnown RBP16.85■□□□□ 0.29
BRCC3-202ENST00000340647 PID1Q7Z2X4 250 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 C11orf96Q7Z7L8 435 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 CCDC50Q8IVM0 306 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 RCBTB1Q8NDN9 531 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 ACTL9Q8TC94 416 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 GLYATL1Q969I3 302 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 RBM41Q96IZ5 413 aaKnown RBP16.85■□□□□ 0.29
BRCC3-202ENST00000340647 FAM118BQ9BPY3 351 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 GPR63Q9BZJ6 419 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 STRADBQ9C0K7 418 aa16.85■□□□□ 0.29
BRCC3-202ENST00000340647 RMI1Q9H9A7 625 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 339.7 ms