RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 CLASP2O75122 1294 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 HRH2P25021 359 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 RPS9P46781 194 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SERPINH1P50454 418 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 ATP6V0D1P61421 351 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 INPP5AQ14642 412 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 CYP2A13Q16696 494 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 GALNT18Q6P9A2 607 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 C16orf87Q6PH81 154 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 CLYBLQ8N0X4 340 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 DHRSXQ8N5I4 330 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 MFSD2AQ8NA29 543 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 OR10Q1Q8NGQ4 319 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 OR10T2Q8NGX3 314 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 ACDQ96AP0 544 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 PGAP3Q96FM1 320 aaPredicted RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 DUS3LQ96G46 650 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 CENPNQ96H22 339 aaPredicted RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 PPM1MQ96MI6 270 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 TRNAU1APQ9NX07 287 aaKnown RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SMPD3Q9NY59 655 aaPredicted RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 HS3ST4Q9Y661 456 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 E9PAM4 449 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 C1RP00736 705 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 RBP1P09455 135 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 IL12AP29459 219 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 RFC2P35250 354 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 GGT5P36269 586 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 CDKN1CP49918 316 aaPredicted RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 C21orf59P57076 290 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 BFSP2Q13515 415 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SIRPB2Q5JXA9 342 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 CENPSQ8N2Z9 138 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 PGBD5Q8N414 524 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 OR2T11Q8NH01 316 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SEPT8Q92599 483 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 CLIP3Q96DZ5 547 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 KCTD14Q9BQ13 255 aaPredicted RBP11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 DGCR6LQ9BY27 220 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 ADNPQ9H2P0 1102 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SLC52A3Q9NQ40 469 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 VPS45Q9NRW7 570 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 ZNF225Q9UK10 706 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 PCDHA9Q9Y5H5 950 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
CCDC144CP-201ENST00000340196 TCRBV5S2A0A599 114 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 CDC7O00311 574 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 IRAK2O43187 625 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 NOBOXO60393 691 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 RASAL1O95294 804 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 TBX18O95935 607 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 PEX11BO96011 259 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 GOT2P00505 430 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 MMP2P08253 660 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 HMBSP08397 361 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ZFP36L2P47974 494 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 GPR15P49685 360 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 CLCN5P51795 746 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 KPNA2P52292 529 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 KPNA1P52294 538 aaPredicted RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 RELAQ04206 551 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 SREBF2Q12772 1141 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 TSNQ15631 228 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 INTS11Q5TA45 600 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ABRAXAS1Q6UWZ7 409 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 DCDC5Q6ZRR9 648 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ABI1Q8IZP0 508 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 TRPV3Q8NET8 790 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 SMARCD1Q96GM5 515 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 FAR2Q96K12 515 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 CARS2Q9HA77 564 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 MRPL40Q9NQ50 206 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 TBCCD1Q9NVR7 557 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ACTR3BQ9P1U1 418 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 EIF3FO00303 357 aaPredicted RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 MUSKO15146 869 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 SYNCRIPO60506 623 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ADAM23O75077 832 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 OCM2P0CE71 109 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 OCMP0CE72 109 aaPredicted RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ALDH4A1P30038 563 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 CAPGP40121 348 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 AIF1P55008 147 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 NFATC3Q12968 1075 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 PIK3R6Q5UE93 754 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 LCN8Q6JVE9 175 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ALDH16A1Q8IZ83 802 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 ROPN1LQ96C74 230 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 MYEOVQ96EZ4 313 aa11.88□□□□□ -0.51
CCDC144CP-201ENST00000340196 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms