RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CPSF6Q16630 551 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLCS-201ENST00000336648 CWF19L1Q69YN2 538 aaKnown RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 SLC44A1Q8WWI5 657 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 DNAJC19Q96DA6 116 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 S100A14Q9HCY8 104 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 INTS10Q9NVR2 710 aaKnown RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 ABCG2Q9UNQ0 655 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 MOXD2PA6NHM9 499 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 A8MX80 341 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 WNT10BO00744 389 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 GIMD1P0DJR0 217 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 SVOPLQ8N434 492 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.32
HLCS-201ENST00000336648 MATN2O00339 956 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 IPO13O94829 963 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 ELFN1P0C7U0 828 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 CRADDP78560 199 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 PPP2R2BQ00005 443 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 CNTN2Q02246 1040 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 DACT2Q5SW24 774 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 GCNT6Q5T4J0 391 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 VSTM1Q6UX27 236 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 KCNK18Q7Z418 384 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 OR8H3Q8N146 312 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 RFKQ969G6 155 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 IL1RAPQ9NPH3 570 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 TBC1D14Q9P2M4 693 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 PPIEQ9UNP9 301 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 PLLPQ9Y342 182 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 SLC25A14O95258 325 aaPredicted RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 SSR2P43308 183 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 GALK1P51570 392 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 SLC4A11Q8NBS3 891 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 AKAP1Q92667 903 aaKnown RBP eCLIP13.02□□□□□ -0.33
HLCS-201ENST00000336648 BTN2A3PQ96KV6 586 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 UPB1Q9UBR1 384 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 KLRC4O43908 158 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 CLUP10909 449 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 ABCG1P45844 678 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 IST1P53990 364 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 KIAA1324Q6UXG2 1013 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 RAVER1Q8IY67 606 aaKnown RBP13.02□□□□□ -0.33
HLCS-201ENST00000336648 SLC34A3Q8N130 599 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 CDADC1Q9BWV3 514 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 TECPR2O15040 1411 aa13.02□□□□□ -0.33
HLCS-201ENST00000336648 DDX3YO15523 660 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 SCN2BO60939 215 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 GATBO75879 557 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 PRH1P02810 166 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 PKMP14618 531 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 MAGEA12P43365 314 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 KLF10Q13118 480 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 CAPSQ13938 189 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ZBTB6Q15916 424 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 VPS26BQ4G0F5 336 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 AMIGO2Q86SJ2 522 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 ZZZ3Q8IYH5 903 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 FIBCD1Q8N539 461 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 PIK3R3Q92569 461 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 TBATAQ96M53 351 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 MFSD1Q9H3U5 465 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 PCDH18Q9HCL0 1135 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 FADS2P1A8MWK0 482 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 XKRYO14609 159 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ATG13O75143 517 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 OR7A10O76100 309 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 POLR2JP52435 117 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 KIAA0319LQ8IZA0 1049 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 GALNT6Q8NCL4 622 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 LSM14AQ8ND56 463 aaKnown RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 OR52K2Q8NGK3 314 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SGK2Q9HBY8 427 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 NKIRAS2Q9NYR9 191 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 TMEM5Q9Y2B1 443 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ABHD14A-ACY1A0A1B0GW23 586 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SPATA31C2B4DYI2 1134 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 FABP3P05413 133 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 PTPN5P54829 565 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
HLCS-201ENST00000336648 GPALPP1Q8IXQ4 340 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
HLCS-201ENST00000336648 SLC30A4O14863 429 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms