RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CWF19L1Q69YN2 538 aaKnown RBP17.59■□□□□ 0.41
LRCH3-201ENST00000334859 AHI1Q8N157 1196 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 SLC43A3Q8NBI5 491 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 TET1Q8NFU7 2136 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 OR2T34Q8NGX1 318 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 OR2T3Q8NH03 318 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 PLD4Q96BZ4 506 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 PRPF18Q99633 342 aaKnown RBP17.59■□□□□ 0.41
LRCH3-201ENST00000334859 CIB1Q99828 191 aa17.59■□□□□ 0.41
LRCH3-201ENST00000334859 MRPL9Q9BYD2 267 aaKnown RBP17.59■□□□□ 0.41
LRCH3-201ENST00000334859 AKAP10O43572 662 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 SNX2O60749 519 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 TIPRLO75663 272 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 TWF1Q12792 350 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 PRMT9Q6P2P2 845 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 MFN1Q8IWA4 741 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 NAT14Q8WUY8 206 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 SEPT8Q92599 483 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 LINGO1Q96FE5 620 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 HOPXQ9BPY8 73 aaPredicted RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 GPATCH1Q9BRR8 931 aaKnown RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 TSEN34Q9BSV6 310 aaKnown RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 NOL11Q9H8H0 719 aaKnown RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 TSR3Q9UJK0 312 aaKnown RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 CNOT11Q9UKZ1 510 aaKnown RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 SMIM31A0A1B0GVY4 71 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 ANKRD66B4E2M5 251 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 E5RI56 91 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 GIPC1O14908 333 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 SNAP91O60641 907 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 VPS4BO75351 444 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 TMCC1O94876 653 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 OR6B1O95007 311 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 MATN4O95460 622 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 CHEK2O96017 543 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 PSMC3P17980 439 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 TUFMP49411 452 aaKnown RBP17.58■□□□□ 0.4
LRCH3-201ENST00000334859 GPNMBQ14956 572 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 SYVN1Q86TM6 617 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 EEF1AKMT1Q8WVE0 214 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 ESAMQ96AP7 390 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 RETREG1Q9H6L5 497 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 CD274Q9NZQ7 290 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 EGFL7Q9UHF1 273 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 PCTPQ9UKL6 214 aa17.58■□□□□ 0.4
LRCH3-201ENST00000334859 FXYD1O00168 92 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 GPR39O43194 453 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 C1RP00736 705 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 ARL1P40616 181 aaPredicted RBP17.57■□□□□ 0.4
LRCH3-201ENST00000334859 IL2P60568 153 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 TRAF2Q12933 501 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 IKBKEQ14164 716 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 TAF12Q16514 161 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 CTSL3PQ5NE16 218 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 ADGRF1Q5T601 910 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 UGT3A1Q6NUS8 523 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 SCIMPQ6UWF3 145 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 CHST9Q7L1S5 443 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 TAS2R42Q7RTR8 314 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 CPNE9Q8IYJ1 553 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 DCBLD1Q8N8Z6 715 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 CD99L2Q8TCZ2 262 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 ZFAND2BQ8WV99 257 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 CANT1Q8WVQ1 401 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 HGH1Q9BTY7 390 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 TRIM8Q9BZR9 551 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 TRIM15Q9C019 465 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 GID8Q9NWU2 228 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 SMPD4Q9NXE4 827 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 TRPM5Q9NZQ8 1165 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 ABCD2Q9UBJ2 740 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 EIF2B4Q9UI10 523 aaKnown RBP17.57■□□□□ 0.4
LRCH3-201ENST00000334859 AURKCQ9UQB9 309 aa17.57■□□□□ 0.4
LRCH3-201ENST00000334859 C7orf72A4D263 438 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 STX16O14662 325 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 HOXA2O43364 376 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 BAIAP3O94812 1187 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 TSPAN12O95859 305 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 RPL5P46777 297 aaKnown RBP17.56■□□□□ 0.4
LRCH3-201ENST00000334859 ARF5P84085 180 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 BFSP2Q13515 415 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 TCTN1Q2MV58 587 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 SLC8B1Q6J4K2 584 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 GPSM1Q86YR5 675 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 FAM110BQ8TC76 370 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 CD200R1Q8TD46 325 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 TMEM175Q9BSA9 504 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 MRPS26Q9BYN8 205 aaKnown RBP17.56■□□□□ 0.4
LRCH3-201ENST00000334859 GRIP2Q9C0E4 1043 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 ZNF696Q9H7X3 374 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 ESRRBO95718 433 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 MLYCDO95822 493 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 CYBBP04839 570 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 CES1P23141 567 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 KCNK10P57789 538 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 PLD1Q13393 1074 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 CXorf57Q6NSI4 855 aaKnown RBP17.56■□□□□ 0.4
LRCH3-201ENST00000334859 KIAA1841Q6NSI8 718 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 HMBOX1Q6NT76 420 aa17.56■□□□□ 0.4
LRCH3-201ENST00000334859 KLHDC10Q6PID8 442 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms