RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CDH4P55283 916 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 INPP5AQ14642 412 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 PPP4R4Q6NUP7 873 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 SYVN1Q86TM6 617 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 NKAPQ8N5F7 415 aaKnown RBP23.22■■□□□ 1.31
NDEL1-201ENST00000334527 LPCAT1Q8NF37 534 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 BIRC8Q96P09 236 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 TRIM8Q9BZR9 551 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 NACA2Q9H009 215 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 SLC52A3Q9NQ40 469 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 MARCH5Q9NX47 278 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 HCSTQ9UBK5 93 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 DNMT3LQ9UJW3 386 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 SAC3D1A6NKF1 404 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 H3BNC9 293 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 CYBBP04839 570 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 SLC11A2P49281 568 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 GATMP50440 423 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 ADRM1Q16186 407 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 RTP2Q5QGT7 225 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 SPATA19Q7Z5L4 167 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 RNF180Q86T96 592 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 CYP2S1Q96SQ9 504 aa23.22■■□□□ 1.31
NDEL1-201ENST00000334527 TDRD1Q9BXT4 1180 aaKnown RBP23.22■■□□□ 1.31
NDEL1-201ENST00000334527 FNDC3AQ9Y2H6 1198 aaKnown RBP23.22■■□□□ 1.31
NDEL1-201ENST00000334527 ARIH1Q9Y4X5 557 aaPredicted RBP23.22■■□□□ 1.31
NDEL1-201ENST00000334527 A0A1B0GVG6 124 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 ENPP3O14638 875 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 HNRNPRO43390 633 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 H6PDO95479 791 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 ATF6P18850 670 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 ATP5C1P36542 298 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 RBBP7Q16576 425 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 COQ5Q5HYK3 327 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 OGFOD2Q6N063 350 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 PSAPL1Q6NUJ1 521 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 PIANPQ8IYJ0 282 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 SIDT2Q8NBJ9 832 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 HAUS8Q9BT25 410 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 CAAP1Q9H8G2 361 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 DUS2Q9NX74 493 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 ACTR3BQ9P1U1 418 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 PCTPQ9UKL6 214 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 TMEM88BA6NKF7 163 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 STX16O14662 325 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 OR1I1O60431 355 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 VPS26AO75436 327 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 CR2P20023 1033 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 PSMA4P25789 261 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 APLP1P51693 650 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 FOXM1Q08050 763 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 NHSL2Q5HYW2 709 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 LCN8Q6JVE9 175 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 DENND1CQ8IV53 801 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 DIS3LQ8TF46 1054 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 VPS33AQ96AX1 596 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 TEX37Q96LM6 180 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 CCT7Q99832 543 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 ANKRD60Q9BZ19 345 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 AIG1Q9NVV5 245 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 FKBPLQ9UIM3 349 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 AGO1Q9UL18 857 aaKnown RBP23.21■■□□□ 1.31
NDEL1-201ENST00000334527 PCDHGC4Q9Y5F7 938 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 PCDHA9Q9Y5H5 950 aa23.21■■□□□ 1.31
NDEL1-201ENST00000334527 ARPC2O15144 300 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 NIPSNAP2O75323 286 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 ESRRBO95718 433 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 CHEK2O96017 543 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 ALDH2P05091 517 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 PRR35P0CG20 571 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 PKMP14618 531 aaKnown RBP23.2■■□□□ 1.3
NDEL1-201ENST00000334527 UGT1A6P19224 532 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 LPOP22079 712 aaPredicted RBP23.2■■□□□ 1.3
NDEL1-201ENST00000334527 IL10P22301 178 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 KCNK10P57789 538 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 NFYCQ13952 458 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 UGT3A1Q6NUS8 523 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 FUT10Q6P4F1 479 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 SCIMPQ6UWF3 145 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 HGH1Q9BTY7 390 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 NUSAP1Q9BXS6 441 aaKnown RBP23.2■■□□□ 1.3
NDEL1-201ENST00000334527 PNPLA3Q9NST1 481 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 MYRFQ9Y2G1 1151 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 HTTP42858 3142 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 A0A1W2PP18 115 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 NT5C1B-RDH14C9J2C7 533 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 PLOD2O00469 737 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 TPST1O60507 370 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 MLYCDO95822 493 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 UROSP10746 265 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 MC4RP32245 332 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 SLC11A1P49279 550 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 PABPC1LQ4VXU2 614 aaKnown RBP23.2■■□□□ 1.3
NDEL1-201ENST00000334527 TXNDC11Q6PKC3 985 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 ZIC5Q96T25 663 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 C1QTNF3Q9BXJ4 246 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 TRIM54Q9BYV2 358 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 OLAHQ9NV23 265 aa23.2■■□□□ 1.3
NDEL1-201ENST00000334527 TRMT6Q9UJA5 497 aaKnown RBP23.2■■□□□ 1.3
NDEL1-201ENST00000334527 ZNF225Q9UK10 706 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms