RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CPNE5Q9HCH3 593 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLC35C2Q9NQQ7 365 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 EDARQ9UNE0 448 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 OAS3Q9Y6K5 1087 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 DGKBQ9Y6T7 804 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ARHGEF28Q8N1W1 1705 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 hCG_1818297A0A087WSY0 165 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 C17orf102A2RUQ5 167 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FAM189A1O60320 539 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A9O60656 530 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TRUB2O95900 331 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 AGR2O95994 175 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 LRG1P02750 347 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A6P19224 532 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A1P22309 533 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A4P22310 534 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A3P35503 534 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 AFF1P51825 1210 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLC7A2P52569 658 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FBXO47Q5MNV8 452 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 C10orf62Q5T681 223 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RBFAQ8N0V3 343 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CHCHD4Q8N4Q1 142 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MFSD2AQ8NA29 543 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLC38A4Q969I6 547 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SH2D3AQ9BRG2 576 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PPA2Q9H2U2 334 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 C12orf65Q9H3J6 166 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ALG9Q9H6U8 611 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A7Q9HAW7 530 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A10Q9HAW8 530 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UGT1A8Q9HAW9 530 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ARHGEF4Q9NR80 690 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 OGDHLQ9ULD0 1010 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 B3GNT3Q9Y2A9 372 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PRRG1O14668 218 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 IFNA21P01568 189 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TXNP10599 105 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ANXA3P12429 323 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RPP38P78345 283 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CUZD1Q86UP6 607 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM161BQ8NDZ6 487 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FBXO32Q969P5 355 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLC7A6OSQ96CW6 309 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PHF21BQ96EK2 531 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FAXDC2Q96IV6 333 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLC4A9Q96Q91 983 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 COLEC11Q9BWP8 271 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SAV1Q9H4B6 383 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FARSBQ9NSD9 589 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 STUB1Q9UNE7 303 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ADGRB1O14514 1584 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CYP11A1P05108 521 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ARF4P18085 180 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CD247P20963 164 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 KIR3DL1P43629 444 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 KHKP50053 298 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RPL38P63173 70 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ARF5P84085 180 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 RBBP4Q09028 425 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FAM196AQ6ZSG2 479 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ZCCHC23Q6ZST2 131 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 BBS12Q6ZW61 710 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 UTS2BQ765I0 119 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 C11orf96Q7Z7L8 435 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SLC9A9Q8IVB4 645 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TESCQ96BS2 214 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MYO19Q96H55 970 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 IFT27Q9BW83 186 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 LRRC3Q9BY71 257 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 KANSL3Q9P2N6 904 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TSPAN16Q9UKR8 245 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PCDHGC3Q9UN70 934 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ATE1O95260 518 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 DNTTP04053 509 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SSTR1P30872 391 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 FSTL1Q12841 308 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SNAPC1Q16533 368 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CTC1Q2NKJ3 1217 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 NEPROQ6NW34 567 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 DCDC5Q6ZRR9 648 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF227Q86WZ6 799 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PHC2Q8IXK0 858 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 IQCKQ8N0W5 287 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PCDH20Q8N6Y1 951 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 TBC1D15Q8TC07 691 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF431Q8TF32 576 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PURBQ96QR8 312 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CCDC106Q9BWC9 280 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF717Q9BY31 904 aaPredicted RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 NARFQ9UHQ1 456 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 USP20Q9Y2K6 914 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 ASB4Q9Y574 426 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PCDHGA11Q9Y5H2 935 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 CCRL2O00421 344 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 MTHFD1P11586 935 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 PDX1P52945 283 aa5.49□□□□□ -1.53
PTPRB-202ENST00000334414 HADHBP55084 474 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 SMAD1Q15797 465 aaKnown RBP5.49□□□□□ -1.53
PTPRB-202ENST00000334414 IRAK1BP1Q5VVH5 260 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms