RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PLK1P53350 603 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ATXN1P54253 815 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ADAM8P78325 824 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 MBTD1Q05BQ5 628 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC34A3Q8N130 599 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SH3RF3Q8TEJ3 882 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 CD101Q93033 1021 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 TMEM143Q96AN5 459 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF486Q96H40 463 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 KBTBD13C9JR72 458 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 APOC4-APOC2K7ER74 178 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 APOC2P02655 101 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 TFRCP02786 760 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 RGS8P57771 180 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 TOR1AIP1Q5JTV8 583 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 PPP2R2DQ66LE6 453 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ADGRD2Q7Z7M1 963 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 OR6J1Q8NGC5 347 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 METTL6Q8TCB7 284 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 HPDLQ96IR7 371 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 MGME1Q9BQP7 344 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 VPS51Q9UID3 782 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 VNN2O95498 520 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SMG8Q8ND04 991 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SIMC1Q8NDZ2 872 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 OR14K1Q8NGZ2 314 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 DDIT4Q9NX09 232 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 IPO13O94829 963 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SCGB1D2O95969 90 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 LRG1P02750 347 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 PRKCIP41743 596 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 OR1G1P47890 313 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 DNASE1L3Q13609 305 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNHIT3Q15649 155 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 NOL9Q5SY16 702 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 GPR139Q6DWJ6 353 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 RIT2Q99578 217 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 AKAP12Q02952 1782 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 DENND4BO75064 1496 aaPredicted RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 GTPBP1O00178 669 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ABCB7O75027 752 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 MED24O75448 989 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 PKLRP30613 574 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 NTSP30990 170 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 COTL1Q14019 142 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 BOP1Q14137 746 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 GXYLT1Q4G148 440 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC30A10Q6XR72 485 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 BAP1Q92560 729 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ZSWIM3Q96MP5 696 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 ELAC1Q9H777 363 aaKnown RBP10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC38A7Q9NVC3 462 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 MAT2BQ9NZL9 334 aa10.29□□□□□ -0.76
SPTBN1-201ENST00000333896 NMT2O60551 498 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 IFNA10P01566 189 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 IFNA4P05014 189 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC2A3P11169 496 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PCSK1P29120 753 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 BUD31P41223 144 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 MC1RQ01726 317 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 BTBD16Q32M84 506 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PRAMEF17Q5VTA0 474 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ADGRG6Q86SQ4 1221 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 AMIGO1Q86WK6 493 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 AP2M1Q96CW1 435 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 FAM86C2PA6NEL3 165 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 A6NHS1 94 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PRR5-ARHGAP8B1AHC4 643 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 KRBOX1C9JBD0 128 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 LGR5O75473 907 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 AGTR1P30556 359 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 SKP1P63208 163 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TXNL4AP83876 142 aaKnown RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ARHGAP8P85298 464 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 MERTKQ12866 999 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 BATFQ16520 125 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 MAPKAPK3Q16644 382 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TRIM40Q6P9F5 258 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 DNAJB14Q8TBM8 379 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 HEXDCQ8WVB3 486 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 FAM84AQ96KN4 292 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 PNMA5Q96PV4 448 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 HEPHQ9BQS7 1158 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 SLCO1B3Q9NPD5 702 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 HMGCRP04035 888 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 CDH17Q12864 832 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 GPR158Q5T848 1215 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ACTL9Q8TC94 416 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ABCG8Q9H221 673 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.28□□□□□ -0.762e-6■■■■□ 20.1
SPTBN1-201ENST00000333896 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 ANXA5P08758 320 aa10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 MYCLP1P12525 358 aaPredicted RBP10.28□□□□□ -0.76
SPTBN1-201ENST00000333896 DCDC1P59894 354 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms