RNA–Protein interactions for RNA: ENST00000333496.14

CLN3-201, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-201ENST00000333496 B4DGG1 531 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 GAPDHSO14556 408 aaPredicted RBP15.67■□□□□ 0.1
CLN3-201ENST00000333496 SLC25A14O95258 325 aaPredicted RBP15.67■□□□□ 0.1
CLN3-201ENST00000333496 STIP1P31948 543 aaKnown RBP15.67■□□□□ 0.1
CLN3-201ENST00000333496 CA5AP35218 305 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 SNX1Q13596 522 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 P3H1Q32P28 736 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 ATP13A5Q4VNC0 1218 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 KHDC1Q4VXA5 237 aaKnown RBP15.67■□□□□ 0.1
CLN3-201ENST00000333496 ZNF569Q5MCW4 686 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 PRUNE1Q86TP1 453 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 C17orf82Q86X59 251 aaPredicted RBP15.67■□□□□ 0.1
CLN3-201ENST00000333496 TAB3Q8N5C8 712 aaPredicted RBP15.67■□□□□ 0.1
CLN3-201ENST00000333496 DCBLD1Q8N8Z6 715 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 NAT6Q93015 286 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 PPP1R2P1Q96PQ5 205 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 CCDC3Q9BQI4 270 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 TRIM39Q9HCM9 518 aa15.67■□□□□ 0.1
CLN3-201ENST00000333496 TRABD2BA6NFA1 517 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 GPR39O43194 453 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 NUAK1O60285 661 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 MT-CO3P00414 261 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 FGGP02679 453 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ETS1P14921 441 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ZNF8P17098 575 aaPredicted RBP15.66■□□□□ 0.1
CLN3-201ENST00000333496 HLTFQ14527 1009 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLN3-201ENST00000333496 C14orf28Q4W4Y0 310 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ADGRG6Q86SQ4 1221 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 GALNT13Q8IUC8 556 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 NAGSQ8N159 534 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 PDCD7Q8N8D1 485 aaKnown RBP15.66■□□□□ 0.1
CLN3-201ENST00000333496 KDF1Q8NAX2 398 aaPredicted RBP15.66■□□□□ 0.1
CLN3-201ENST00000333496 GLIS1Q8NBF1 620 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 MAPK15Q8TD08 544 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 DTX3LQ8TDB6 740 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 PATE1Q8WXA2 126 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 CCDC74AQ96AQ1 378 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 VPS35Q96QK1 796 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ZNHIT2Q9UHR6 403 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ZNF148Q9UQR1 794 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 KCTD3Q9Y597 815 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ZFHX4Q86UP3 3567 aa15.66■□□□□ 0.1
CLN3-201ENST00000333496 ZZEF1O43149 2961 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 MTX2O75431 263 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 TUBB4AP04350 444 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 SPAM1P38567 509 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 ACTR1BP42025 376 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 ACTR1AP61163 376 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 TAF1AQ15573 450 aaPredicted RBP15.65■□□□□ 0.1
CLN3-201ENST00000333496 CHRNA6Q15825 494 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 CCNG2Q16589 344 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 FAM151BQ6UXP7 276 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 CHST15Q7LFX5 561 aaPredicted RBP15.65■□□□□ 0.1
CLN3-201ENST00000333496 BRSK1Q8TDC3 778 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 ZDHHC1Q8WTX9 485 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 ABCG4Q9H172 646 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 OR2AG1Q9H205 316 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 RMI1Q9H9A7 625 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 PKP3Q9Y446 797 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 IGF2RP11717 2491 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 CHUKO15111 745 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 STX7O15400 261 aaKnown RBP15.65■□□□□ 0.1
CLN3-201ENST00000333496 GRID2O43424 1007 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 CEP104O60308 925 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A9O60656 530 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 PPFIA2O75334 1257 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 AP2A1O95782 977 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 IFNB1P01574 187 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 GLB1P16278 677 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A6P19224 532 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 LPOP22079 712 aaPredicted RBP15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A1P22309 533 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A4P22310 534 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A3P35503 534 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A5P35504 534 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 CERCAMQ5T4B2 595 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 ZDHHC20Q5W0Z9 365 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 DRICH1Q6PGQ1 229 aaPredicted RBP15.65■□□□□ 0.1
CLN3-201ENST00000333496 PHYKPLQ8IUZ5 450 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 OR4K2Q8NGD2 314 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 MDM1Q8TC05 714 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A7Q9HAW7 530 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A10Q9HAW8 530 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 UGT1A8Q9HAW9 530 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 ETNK1Q9HBU6 452 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLN3-201ENST00000333496 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 RNF215Q9Y6U7 377 aa15.65■□□□□ 0.1
CLN3-201ENST00000333496 PIKFYVEQ9Y2I7 2098 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 GLYATL1P3A0A0U1RQE8 302 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 A0A1W2PQM1 296 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 NTN3O00634 580 aaPredicted RBP15.64■□□□□ 0.09
CLN3-201ENST00000333496 LDB2O43679 373 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 ECEL1O95672 775 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 EML2O95834 649 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 MAZP56270 477 aaKnown RBP15.64■□□□□ 0.09
CLN3-201ENST00000333496 LRP8Q14114 963 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 SLC35F6Q8N357 371 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 OR6C4Q8NGE1 309 aa15.64■□□□□ 0.09
CLN3-201ENST00000333496 OR13C4Q8NGS5 318 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms