RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FAM45BPQ6NSW5 357 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF549Q6P9A3 640 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 EXOC3L1Q86VI1 746 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TRIM69Q86WT6 500 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 CAMKK1Q8N5S9 505 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 GPATCH11Q8N954 259 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 DDHD1Q8NEL9 900 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 OR2T34Q8NGX1 318 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM45AQ8TCE6 357 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ASB12Q8WXK4 309 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ELMO2Q96JJ3 720 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 SERAC1Q96JX3 654 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 AARSD1Q9BTE6 412 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 P2RY12Q9H244 342 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 DLGAP2Q9P1A6 1054 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TMPRSS11EQ9UL52 423 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 CRYL1Q9Y2S2 319 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PCDHB1Q9Y5F3 818 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3DA0A087WVF3 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3IA0A087WXS9 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3EA0A087X179 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3KA0A087X1G2 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3FA6NER0 549 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PRR23AA6NEV1 266 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 C10orf142B7Z368 130 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3LB9A6J9 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF217O75362 1048 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TECTAO75443 2155 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3HP0C7X1 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF7P17097 686 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 RPS3P23396 243 aaKnown RBP eCLIP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 OAS2P29728 719 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ACSL1P33121 698 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 CCR3P51677 355 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PPP2CBP62714 309 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PPP2CAP67775 309 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 POU4F1Q01851 419 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 GPRC6AQ5T6X5 926 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3GQ6DHY5 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 RAET1GQ6H3X3 334 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3CQ6IPX1 549 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 SLC41A1Q8IVJ1 513 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 TBC1D3Q8IZP1 549 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ACVR1CQ8NER5 493 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 ACMSDQ8TDX5 336 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 NDNQ99608 321 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 COPS8Q99627 209 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 C1QTNF7Q9BXJ2 289 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 SNX15Q9NRS6 342 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 SLC39A10Q9ULF5 831 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 CYP8B1Q9UNU6 501 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PLXND1Q9Y4D7 1925 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 COMMD10Q9Y6G5 202 aa10.16□□□□□ -0.78
VIPAS39-201ENST00000327028 PRMT5O14744 637 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 OR1I1O60431 355 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 SEMA4FO95754 770 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 PDGFBP01127 241 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 ESR1P03372 595 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 TEAD1P28347 426 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 GPR1P46091 355 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 CXCL12P48061 93 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 CSRP3P50461 194 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 SGCGQ13326 291 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 FGL2Q14314 439 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 USP10Q14694 798 aaKnown RBP10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 LRRC14Q15048 493 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 ZKSCAN8Q15776 578 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 WSCD2Q2TBF2 565 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 LDLRAP1Q5SW96 308 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 HECTD2Q5U5R9 776 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 ADAMTSL4Q6UY14 1074 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 PHYKPLQ8IUZ5 450 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 TP53I13Q8NBR0 393 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 HEXDCQ8WVB3 486 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 BTN2A2Q8WVV5 523 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 GLYATL1Q969I3 302 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 TSPAN17Q96FV3 270 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 BIRC8Q96P09 236 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 SMC6Q96SB8 1091 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 SLC17A9Q9BYT1 436 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 CLPBQ9H078 707 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 CCDC68Q9H2F9 335 aa10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 SSU72Q9NP77 194 aaKnown RBP10.15□□□□□ -0.78
VIPAS39-201ENST00000327028 K7ESM1 405 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 PKMP14618 531 aaKnown RBP10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 KRT4P19013 534 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 AOC1P19801 751 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 FDXRP22570 491 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 SLC18A2Q05940 514 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 TMEM31Q5JXX7 168 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 CTSL3PQ5NE16 218 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 SH2D5Q6ZV89 423 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 CMC1Q7Z7K0 106 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 C4orf33Q8N1A6 199 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 PELI3Q8N2H9 469 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 ALKBH8Q96BT7 664 aaKnown RBP10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 CCDC97Q96F63 343 aaPredicted RBP10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 CABS1Q96KC9 395 aa10.15□□□□□ -0.79
VIPAS39-201ENST00000327028 BOCQ9BWV1 1114 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms