RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 RBM4Q9BWF3 364 aaKnown RBP14.65□□□□□ -0.06
TCOF1-201ENST00000323668 SELENONQ9NZV5 590 aa14.65□□□□□ -0.06
TCOF1-201ENST00000323668 ARIH1Q9Y4X5 557 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-201ENST00000323668 ELOVL7A1L3X0 281 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 RXRGP48443 463 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PGGT1BP53609 377 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 TP53INP2Q8IXH6 220 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 OR8H2Q8N162 312 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 IPPKQ9H8X2 491 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 DYRK4Q9NR20 520 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 DOLKQ9UPQ8 538 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 SAMHD1Q9Y3Z3 626 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 IFRD1O00458 451 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 RFXANKO14593 260 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 HTRA2O43464 458 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 SORBS2O94875 1100 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 NTRK1P04629 796 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 CAPN1P07384 714 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ALOX12P18054 663 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 MLLT6P55198 1093 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF284Q2VY69 593 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ADCK2Q7Z695 626 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 SPPL2BQ8TCT7 592 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ARNTL2Q8WYA1 636 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 OTULINQ96BN8 352 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZHX1-C8orf76Q96EF9 292 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 C20orf27Q9GZN8 174 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PTBP2Q9UKA9 531 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 TLL2Q9Y6L7 1015 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 G3V2L1 256 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 TRIM24O15164 1050 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZBTB11O95625 1053 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 IGSF6O95976 241 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 EGFLAMQ63HQ2 1017 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 GALNT18Q6P9A2 607 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF605Q86T29 641 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 RBFAQ8N0V3 343 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PLEKHA8Q96JA3 519 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 SLC2A13Q96QE2 648 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 LRRC3Q9BY71 257 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 CRTAC1Q9NQ79 661 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 EIF2B4Q9UI10 523 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZCWPW2A0A1B0GU75 182 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PDZK1P1A8MUH7 402 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PFKMP08237 780 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 SLC26A3P40879 764 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 EEFSECP57772 596 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 SULT2A1Q06520 285 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PIGGQ5H8A4 983 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZC3H12BQ5HYM0 836 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZCCHC8Q6NZY4 707 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 DDX53Q86TM3 631 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 STARD8Q92502 1023 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ITCHQ96J02 903 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZBED2Q9BTP6 218 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 TDRD1Q9BXT4 1180 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 WDR12Q9GZL7 423 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 LIN28AQ9H9Z2 209 aaKnown RBP14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ZDHHC7Q9NXF8 308 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 EMCNQ9ULC0 261 aa14.64□□□□□ -0.07
TCOF1-201ENST00000323668 ECM29Q5VYK3 1845 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 MYOCOSA0A1B0GUC4 107 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ASNA1O43681 348 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 BEST1O76090 585 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CTPS1P17812 591 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 HDCP19113 662 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF423Q2M1K9 1284 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 HIPK1Q86Z02 1210 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TSGA13Q96PP4 275 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CCNB1IP1Q9NPC3 277 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 INTS10Q9NVR2 710 aaKnown RBP14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TEKT2Q9UIF3 430 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ITGB1BP2Q9UKP3 347 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 RAI2Q9Y5P3 530 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 LOC100506127A0A0U1RQW1 187 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TYMPP19971 482 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 GSK3BP49841 420 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ERVK-8P63133 956 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PPP1R3AQ16821 1122 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 SLCO6A1Q86UG4 719 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 OR13C4Q8NGS5 318 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 MED8Q96G25 268 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PANX1Q96RD7 426 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 GLI3P10071 1580 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 SH3BGRLO75368 114 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CLDN11O75508 207 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF12P17014 697 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TACR2P21452 398 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 SERPINA4P29622 427 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 ACADVLP49748 655 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 HPCAP84074 193 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 SFSWAPQ12872 951 aaKnown RBP14.63□□□□□ -0.07
TCOF1-201ENST00000323668 CHSY3Q70JA7 882 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 PIM3Q86V86 326 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 TMEM159Q96B96 161 aa14.63□□□□□ -0.07
TCOF1-201ENST00000323668 C16orf70Q9BSU1 422 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms