RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 RDH11Q8TC12 318 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 TMEM74Q96NL1 305 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 WRAP53Q9BUR4 548 aaKnown RBP16.39■□□□□ 0.21
CLIP4-201ENST00000320081 CXCL16Q9H2A7 254 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 GMPPBQ9Y5P6 360 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 CPQQ9Y646 472 aa16.39■□□□□ 0.21
CLIP4-201ENST00000320081 NAE1Q13564 534 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 ACBD5Q5T8D3 534 aaPredicted RBP16.38■□□□□ 0.21
CLIP4-201ENST00000320081 FAM192AQ9GZU8 254 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 EXD2Q9NVH0 621 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 HS3ST4Q9Y661 456 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 A8MT66 165 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 ZNF132P52740 706 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 FAM187BQ17R55 369 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 FAM174BQ3ZCQ3 159 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 CHST15Q7LFX5 561 aaPredicted RBP16.38■□□□□ 0.21
CLIP4-201ENST00000320081 SLC7A6OSQ96CW6 309 aaPredicted RBP16.38■□□□□ 0.21
CLIP4-201ENST00000320081 ASB2Q96Q27 587 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 NPY6RQ99463 290 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 RAB23Q9ULC3 237 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 ASF1AQ9Y294 204 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 GVINP1Q7Z2Y8 2422 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 ACSL4O60488 711 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 POLR2JP52435 117 aaKnown RBP16.38■□□□□ 0.21
CLIP4-201ENST00000320081 CYP4F8P98187 520 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 LAPTM4AQ15012 233 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 PLPP4Q5VZY2 271 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 ABRAXAS1Q6UWZ7 409 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 MYO19Q96H55 970 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 TMEM245Q9H330 911 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 EPB41L1Q9H4G0 881 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 BRD9Q9H8M2 597 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 CTPS2Q9NRF8 586 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 OXSMQ9NWU1 459 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 DNAJC28Q9NX36 388 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 GNPTGQ9UJJ9 305 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 PRKAB1Q9Y478 270 aa16.38■□□□□ 0.21
CLIP4-201ENST00000320081 A0A0D9SEW6 157 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 WFS1O76024 890 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 OCM2P0CE71 109 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 OCMP0CE72 109 aaPredicted RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 TXNDC8Q6A555 127 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 FAXDC2Q96IV6 333 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 AARSD1Q9BTE6 412 aaKnown RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 SSU72Q9NP77 194 aaKnown RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 SLC18A2Q05940 514 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 RABL3Q5HYI8 236 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 SH3D19Q5HYK7 790 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 ADHFE1Q8IWW8 467 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 SYT11Q9BT88 431 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 GIMAP4Q9NUV9 329 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 DNAJB4Q9UDY4 337 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 MRPS23Q9Y3D9 190 aaKnown RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 LYVE1Q9Y5Y7 322 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 A0A0G2JN53 185 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 hCG_2039718K7EN88 272 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 CCL16O15467 120 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 CDK14O94921 469 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 MAPK9P45984 424 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 GLUD2P49448 558 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 ATP6V0D1P61421 351 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 MOGSQ13724 837 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 PPP1R15BQ5SWA1 713 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 METTL21CQ5VZV1 264 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 OGFOD2Q6N063 350 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 TMPRSS11BQ86T26 416 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 HIPK1Q86Z02 1210 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 SPNS2Q8IVW8 549 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 NPWQ8N729 165 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 OR2T34Q8NGX1 318 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 OR2T3Q8NH03 318 aa16.37■□□□□ 0.21
CLIP4-201ENST00000320081 CDK5RAP1Q96SZ6 601 aaKnown RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 SOX17Q9H6I2 414 aaPredicted RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 TRIM45Q9H8W5 580 aaPredicted RBP16.37■□□□□ 0.21
CLIP4-201ENST00000320081 AHCYL1O43865 530 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 GPR1P46091 355 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 RPIAP49247 311 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 EIF2B2P49770 351 aaKnown RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 INCA1Q0VD86 236 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 LCP2Q13094 533 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 GSTA3Q16772 222 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 SFT2D3Q587I9 215 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 SERPINA9Q86WD7 417 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 SFRP1Q8N474 314 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 ACTRT2Q8TDY3 377 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 CLIP3Q96DZ5 547 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 PPP3R2Q96LZ3 170 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 ASAH2Q9NR71 780 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 CLDN11O75508 207 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 ANKRD23Q86SG2 305 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 RBFAQ8N0V3 343 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 BBS4Q96RK4 519 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 AKTIPQ9H8T0 292 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms