RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 KIR2DS3K7RE56 304 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 INPP4BO15327 924 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 NKX2-8O15522 239 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 MFSD11O43934 449 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 CLDN7O95471 211 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 FAM228BP0C875 321 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 CCNCP24863 283 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 MAN1A1P33908 653 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 CASRP41180 1078 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 SPINT3P49223 89 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 CLCNKAP51800 687 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 EPHB1P54762 984 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 DSC2Q02487 901 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 MMRN1Q13201 1228 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 MAP7Q14244 749 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 KIR2DS5Q14953 304 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 IFI16Q16666 785 aaKnown RBP14.08□□□□□ -0.16
RPP40-201ENST00000319533 CCDC122Q5T0U0 273 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
RPP40-201ENST00000319533 NCBP2-AS2Q69YL0 99 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 TIGD7Q6NT04 549 aaPredicted RBP14.08□□□□□ -0.16
RPP40-201ENST00000319533 LYSMD3Q7Z3D4 306 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 PTRH1Q86Y79 214 aaKnown RBP14.08□□□□□ -0.16
RPP40-201ENST00000319533 THAP2Q9H0W7 228 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 TRIT1Q9H3H1 467 aaKnown RBP14.08□□□□□ -0.16
RPP40-201ENST00000319533 GPN2Q9H9Y4 310 aaPredicted RBP14.08□□□□□ -0.16
RPP40-201ENST00000319533 RBM22Q9NW64 420 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPP40-201ENST00000319533 ANAPC2Q9UJX6 822 aa14.08□□□□□ -0.16
RPP40-201ENST00000319533 DOPEY2Q9Y3R5 2298 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CLEC18AA5D8T8 446 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 OR5K4A6NMS3 321 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 FADS2P1A8MWK0 482 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 ASMTLO95671 621 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 DLGAP3O95886 979 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 ATP1A1P05023 1023 aaKnown RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 CYP1A2P05177 515 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CD48P09326 243 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 ANKRD34CP0C6C1 535 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 F3P13726 295 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 SLC2A4P14672 509 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CA4P22748 312 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 FOXK1P85037 733 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 ITKQ08881 620 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CDC20Q12834 499 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 NFATC2Q13469 925 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 DPYSL3Q14195 570 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 KRT81Q14533 505 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CLEC18BQ6UXF7 455 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CHST15Q7LFX5 561 aaPredicted RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 SLC9B2Q86UD5 537 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 AVL9Q8NBF6 648 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CLEC18CQ8NCF0 446 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 KIAA1143Q96AT1 154 aaPredicted RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 BTBD6Q96KE9 485 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 DNAJC7Q99615 494 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CTRCQ99895 268 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 EPN3Q9H201 632 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 CARD9Q9H257 536 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 FAM83DQ9H4H8 585 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 STN1Q9H668 368 aaKnown RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 PCDH9Q9HC56 1237 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 APMAPQ9HDC9 416 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 HAUS2Q9NVX0 235 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 SIDT1Q9NXL6 827 aaKnown RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 ANAPC7Q9UJX3 599 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 ADGRG1Q9Y653 693 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 MN1Q10571 1320 aaPredicted RBP14.07□□□□□ -0.16
RPP40-201ENST00000319533 NBASA2RRP1 2371 aa14.07□□□□□ -0.16
RPP40-201ENST00000319533 LILRA5A6NI73 299 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 A8MU76 341 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 NUAK1O60285 661 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 MFAP3LO75121 409 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 STK17BO94768 372 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 C9P02748 559 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 UBE2IP63279 158 aaKnown RBP14.06□□□□□ -0.16
RPP40-201ENST00000319533 QPCTQ16769 361 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 SNAP47Q5SQN1 464 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 SARM1Q6SZW1 724 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 CNGA4Q8IV77 575 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 NCSTNQ92542 709 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 FAF2Q96CS3 445 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 NUP85Q9BW27 656 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 TRIM5Q9C035 493 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 ABHD10Q9NUJ1 306 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 CPNE7Q9UBL6 633 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 KCNK6Q9Y257 313 aa14.06□□□□□ -0.16
RPP40-201ENST00000319533 SSU72P8A0A1W2PR75 194 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 ANKRD66B4E2M5 251 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 MYO1FO00160 1098 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 POLR1CO15160 346 aaPredicted RBP14.05□□□□□ -0.16
RPP40-201ENST00000319533 GRID2O43424 1007 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 AKR1B10O60218 316 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 HLA-DQB2P05538 268 aa14.05□□□□□ -0.16
RPP40-201ENST00000319533 MMP2P08253 660 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms