RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PPM1MQ96MI6 270 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 MRM3Q9HC36 420 aaKnown RBP13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 SH3BP4Q9P0V3 963 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 TBC1D30Q9Y2I9 924 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 M0QZQ0 153 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 PRAMEF11O60813 436 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 IL1BP01584 269 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 UGT2B4P06133 528 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 ADH1AP07327 375 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 GSTT1P30711 240 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 AP5B1Q2VPB7 878 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 SCD5Q86SK9 330 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 RAB42Q8N4Z0 105 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 UTP4Q969X6 686 aaKnown RBP13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 ERLEC1Q96DZ1 483 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 CNPP09543 421 aaKnown RBP13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 SEMG2Q02383 582 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 TRMT11Q7Z4G4 463 aaKnown RBP13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 FBXO27Q8NI29 283 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 UGT2B28Q9BY64 529 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 TFB2MQ9H5Q4 396 aaKnown RBP13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 DOCK5Q9H7D0 1870 aa13.33□□□□□ -0.28
PCDHB9-201ENST00000316105 SIPA1L1O43166 1804 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ESR1P03372 595 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 USP46P62068 366 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 SPATA19Q7Z5L4 167 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 SERPINA9Q86WD7 417 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 PNPLA1Q8N8W4 532 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 OR9I1Q8NGQ6 314 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 GFM2Q969S9 779 aaKnown RBP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 IPPKQ9H8X2 491 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 DYRK1BQ9Y463 629 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 YIPF1Q9Y548 306 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 PPM1AP35813 382 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ACSM2AQ08AH3 577 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 RFTN1Q14699 578 aaPredicted RBP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 C6orf52Q5T4I8 152 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ACSM2BQ68CK6 577 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 GCNT7Q6ZNI0 430 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 METTL3Q86U44 580 aaKnown RBP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ZDHHC13Q8IUH4 622 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 TMEM132CQ8N3T6 1108 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 MZB1Q8WU39 189 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 AUTS2Q8WXX7 1259 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 LRRC42Q9Y546 428 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 GABBR2O75899 941 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 PAPSS2O95340 614 aaPredicted RBP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 CXCL14O95715 111 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 FYNP06241 537 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ETS2P15036 469 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 PTGER3P43115 390 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ANO7Q6IWH7 933 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 CCDC81Q6ZN84 652 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ZNF621Q6ZSS3 439 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 CACUL1Q86Y37 369 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 FIBCD1Q8N539 461 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 TSPAN14Q8NG11 270 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 OR2T34Q8NGX1 318 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 OR2T3Q8NH03 318 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 KATNBL1Q9H079 304 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 ZBTB26Q9HCK0 441 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 NME7Q9Y5B8 376 aa13.32□□□□□ -0.28
PCDHB9-201ENST00000316105 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 CAPN1P07384 714 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 ABCB1P08183 1280 aaPredicted RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 UROSP10746 265 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 COL6A1P12109 1028 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 LAG3P18627 525 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 RPL5P46777 297 aaKnown RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 RAD23AP54725 363 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 AP1S1P61966 158 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 HERC3Q15034 1050 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 MPPE1Q53F39 396 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 DNAJB7Q7Z6W7 309 aaPredicted RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 CLHC1Q8NHS4 586 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 SNX6Q9UNH7 406 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 LZTS1Q9Y250 596 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 NEDD8-MDP1E9PL57 170 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 CATP04040 527 aaKnown RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 DNAJB1P25685 340 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 ZIK1Q3SY52 487 aaPredicted RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 RAB41Q5JT25 222 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 AARSD1Q9BTE6 412 aaKnown RBP13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 OSBPL11Q9BXB4 747 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 EMCNQ9ULC0 261 aa13.31□□□□□ -0.28
PCDHB9-201ENST00000316105 FAM149AA5PLN7 773 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms