RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 TAS2R13Q9NYV9 303 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 HSFX1Q9UBD0 423 aa12.35□□□□□ -0.43
RNF4-201ENST00000314289 LSM7Q9UK45 103 aaKnown RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
RNF4-201ENST00000314289 SPTBN5Q9NRC6 3674 aaKnown RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CLDN7O95471 211 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CTSAP10619 480 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TCN1P20061 433 aaPredicted RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 IMPDH1P20839 514 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 DNAJB1P25685 340 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 WEE1P30291 646 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 PPARGP37231 505 aaPredicted RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 AQP4P55087 323 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 DNAJB13P59910 316 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 MED21Q13503 144 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TYSND1Q2T9J0 566 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 DGKKQ5KSL6 1271 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CTSL3PQ5NE16 218 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 ZSWIM9Q86XI8 627 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 MID1IP1Q9NPA3 183 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CCDC167Q9P0B6 97 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CDH22Q9UJ99 828 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 STOML2Q9UJZ1 356 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 BTRCQ9Y297 605 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TRAF6Q9Y4K3 522 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 DNAH14Q0VDD8 3507 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 OR6B1O95007 311 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 OLFM2O95897 454 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 OGNP20774 298 aaKnown RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 PEX2P28328 305 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 GJA8P48165 433 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CBX2Q14781 532 aaPredicted RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 C1orf53Q5VUE5 145 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 SCIMPQ6UWF3 145 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 DHDDSQ86SQ9 333 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TSPAN33Q86UF1 283 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 SATL1Q86VE3 508 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TMEM25Q86YD3 366 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TTC30BQ8N4P2 665 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 FAM156AQ8NDB6 213 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 MYO19Q96H55 970 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 LRRC3Q9BY71 257 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 ZNF711Q9Y462 761 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 ASB1Q9Y576 335 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 OBSL1O75147 1896 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 E5RI56 91 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 PGM3O95394 542 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 ATP5BP06576 529 aaKnown RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 LINC00271P0C7V0 271 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 PRDX3P30048 256 aaKnown RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 PPP3CCP48454 512 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CYLC2Q14093 348 aaPredicted RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 C18orf21Q32NC0 220 aaPredicted RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 TBC1D25Q3MII6 688 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 CYHR1Q6ZMK1 362 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 NAT16Q8N8M0 369 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 FAM81AQ8TBF8 368 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 C2orf49Q9BVC5 232 aaPredicted RBP12.34□□□□□ -0.43
RNF4-201ENST00000314289 C1orf21Q9H246 121 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 LINC00597Q9H2U6 94 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 VTI1BQ9UEU0 232 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 PKP3Q9Y446 797 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 TIMM22Q9Y584 194 aa12.34□□□□□ -0.43
RNF4-201ENST00000314289 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 EEF1DP29692 281 aaKnown RBP12.33□□□□□ -0.44
RNF4-201ENST00000314289 HLA-FP30511 346 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 GRIA2P42262 883 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 HERVK_113P63132 956 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 TRIP10Q15642 601 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 LAYNQ6UX15 382 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 DCAF4L2Q8NA75 395 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 PIH1D2Q8WWB5 315 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 ATOH8Q96SQ7 321 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 ERVK-6Q9BXR3 956 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 SLCO3A1Q9UIG8 710 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 PTPRSQ13332 1948 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 TRAV19A0A0A6YYK7 116 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 RGSL1A5PLK6 1076 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 PER2O15055 1255 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 CLASP2O75122 1294 aaKnown RBP12.33□□□□□ -0.44
RNF4-201ENST00000314289 ECI2O75521 394 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 PKMP14618 531 aaKnown RBP12.33□□□□□ -0.44
RNF4-201ENST00000314289 PPM1AP35813 382 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 ARL1P40616 181 aaPredicted RBP12.33□□□□□ -0.44
RNF4-201ENST00000314289 BCL2L1Q07817 233 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 TEAD2Q15562 447 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 PLEKHG6Q3KR16 790 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 MMEL1Q495T6 779 aa12.33□□□□□ -0.44
RNF4-201ENST00000314289 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
RNF4-201ENST00000314289 INO80DQ53TQ3 878 aaPredicted RBP12.33□□□□□ -0.44
RNF4-201ENST00000314289 METTL21CQ5VZV1 264 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms