RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TDRD1Q9BXT4 1180 aaKnown RBP8.09□□□□□ -1.11
TPM3-203ENST00000312970 PCDH9Q9HC56 1237 aa8.09□□□□□ -1.11
TPM3-203ENST00000312970 KCNK4Q9NYG8 393 aa8.09□□□□□ -1.11
TPM3-203ENST00000312970 FOXJ2Q9P0K8 574 aa8.09□□□□□ -1.11
TPM3-203ENST00000312970 UVRAGQ9P2Y5 699 aa8.09□□□□□ -1.11
TPM3-203ENST00000312970 TTLL3Q9Y4R7 772 aa8.09□□□□□ -1.11
TPM3-203ENST00000312970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.09□□□□□ -1.111e-10■■■□□ 16.8
TPM3-203ENST00000312970 SCN8AQ9UQD0 1980 aa8.09□□□□□ -1.11
TPM3-203ENST00000312970 USP9YO00507 2555 aaPredicted RBP8.09□□□□□ -1.12
TPM3-203ENST00000312970 CENPEQ02224 2701 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 IGHV1OR21-1A0A087WYE8 117 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 RGSL1A5PLK6 1076 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 ANKRD66B4E2M5 251 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 INPP4BO15327 924 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 DNAJC6O75061 913 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 MAP3K6O95382 1288 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 JCHAINP01591 159 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 GYPCP04921 128 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 ATP1A1P05023 1023 aaKnown RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 SFTPCP11686 197 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 KDELR1P24390 212 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 HNRNPH3P31942 346 aaKnown RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 CSTF2P33240 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
TPM3-203ENST00000312970 GJC1P36383 396 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 FASLGP48023 281 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 SPINT3P49223 89 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 TAS2R40P59535 323 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 GPLD1P80108 840 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 SLC10A2Q12908 348 aaPredicted RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 SRSF6Q13247 344 aaKnown RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 LINC00303Q3SY05 128 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 ZFYVE27Q5T4F4 411 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 TMEM71Q6P5X7 295 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 MARK2Q7KZI7 788 aaKnown RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 CHST15Q7LFX5 561 aaPredicted RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 TRIM74Q86UV6 250 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 CCDC13Q8IYE1 715 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 PQLC3Q8N755 202 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 EXD3Q8N9H8 876 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 AGBL5Q8NDL9 886 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 CCDC112Q8NEF3 446 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 ARMC2Q8NEN0 867 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 LPCAT1Q8NF37 534 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 CCHCR1Q8TD31 782 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 CTNNBL1Q8WYA6 563 aaPredicted RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 FAF2Q96CS3 445 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 AHCYL2Q96HN2 611 aaKnown RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 CCDC74BQ96LY2 380 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 DMRTB1Q96MA1 342 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 RNF157Q96PX1 679 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 CITED4Q96RK1 184 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 LYSMD1Q96S90 227 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 ADGRE3Q9BY15 652 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 FAM83DQ9H4H8 585 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 RMI1Q9H9A7 625 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 IFNKQ9P0W0 207 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 VPS18Q9P253 973 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 CNOT6Q9ULM6 557 aaKnown RBP8.08□□□□□ -1.12
TPM3-203ENST00000312970 NENFQ9UMX5 172 aa8.08□□□□□ -1.12
TPM3-203ENST00000312970 C1orf232A0A0U1RR37 186 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 STMND1H3BQB6 276 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 SLC28A2O43868 658 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 HLA-DQB2P05538 268 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 TPM3P06753 285 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 MMP2P08253 660 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 MPSTP25325 297 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 HSD3B2P26439 372 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 CD86P42081 329 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 PPM1FP49593 454 aaPredicted RBP8.07□□□□□ -1.12
TPM3-203ENST00000312970 GBE1Q04446 702 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 SLC18A3Q16572 532 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 COLEC12Q5KU26 742 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.07□□□□□ -1.12
TPM3-203ENST00000312970 IYDQ6PHW0 289 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 VASH2Q86V25 355 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 CPNE8Q86YQ8 564 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 SFRP1Q8N474 314 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 OR8K1Q8NGG5 319 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 OR10G6Q8NH81 332 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 EXTL1Q92935 676 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 NKD1Q969G9 470 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 SH3KBP1Q96B97 665 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 HDAC11Q96DB2 347 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 MRFAP1L1Q96HT8 127 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 ZNF830Q96NB3 372 aaPredicted RBP8.07□□□□□ -1.12
TPM3-203ENST00000312970 WDR24Q96S15 920 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 SLC38A3Q99624 504 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 MAK16Q9BXY0 300 aaKnown RBP8.07□□□□□ -1.12
TPM3-203ENST00000312970 ASPSCR1Q9BZE9 553 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 SLC39A1Q9NY26 324 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 DTLQ9NZJ0 730 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 PKD2L2Q9NZM6 624 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 PDP2Q9P2J9 529 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 PCDHGA3Q9Y5H0 932 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 NBASA2RRP1 2371 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 ITPR2Q14571 2701 aa8.07□□□□□ -1.12
TPM3-203ENST00000312970 OR5K4A6NMS3 321 aa8.06□□□□□ -1.12
TPM3-203ENST00000312970 ZNF487B1APH4 448 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms