RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SLC16A12Q6ZSM3 486 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 NDNFQ8TB73 568 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 ITFG1Q8TB96 612 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 ITCHQ96J02 903 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 CNDP2Q96KP4 475 aaKnown RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 UBXN10Q96LJ8 280 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 ACOX2Q99424 681 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 TRIM54Q9BYV2 358 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 MARCH4Q9P2E8 410 aaPredicted RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 KCTD3Q9Y597 815 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 HTR1AP08908 422 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 TCEA1P23193 301 aaKnown RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 DNAJB2P25686 324 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 PIGAP37287 484 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 WNT3AP56704 352 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 VBP1P61758 197 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 SLC13A2Q13183 592 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 SNX17Q15036 470 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 PHKG1Q16816 387 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 NOL9Q5SY16 702 aaKnown RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 PSMA8Q8TAA3 256 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 FIG4Q92562 907 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 EMID1Q96A84 441 aaPredicted RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 NTAN1Q96AB6 310 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 FKBP10Q96AY3 582 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 WDR12Q9GZL7 423 aaKnown RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 NOL6Q9H6R4 1146 aaKnown RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 NDFIP2Q9NV92 336 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 SUN2Q9UH99 717 aa14.6□□□□□ -0.07
COL6A2-202ENST00000310645 PNMA8BQ9ULN7 279 aaPredicted RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 UBQLN1Q9UMX0 589 aaKnown RBP14.6□□□□□ -0.07
COL6A2-202ENST00000310645 MCM3APO60318 1980 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SCN4AP35499 1836 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SMIM28A0A1B0GU29 152 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ASPDHA6ND91 283 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SYCE1LA8MT33 242 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 PSMD11O00231 422 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 DAOAP59103 153 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CHRNB3Q05901 458 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 PTPRCAPQ14761 206 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 DEPDC1Q5TB30 811 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SPESP1Q6UW49 350 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ANKRD13BQ86YJ7 626 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ZNF555Q8NEP9 628 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CAPSLQ8WWF8 208 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 FCRL5Q96RD9 977 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 HBEGFQ99075 208 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ENTPD7Q9NQZ7 604 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 C8orf4Q9NR00 106 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 A6NL46 340 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SUPT3HB4E1H0 165 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 NDUFS2O75306 463 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ALPLP05186 524 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 DPEP1P16444 411 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 GMPSP49915 693 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ARSDP51689 593 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CCNA1P78396 465 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CD47Q08722 323 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 DMPKQ09013 629 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 GALNT1Q10472 559 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ZBTB6Q15916 424 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 DPY19L1Q2PZI1 675 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CTU2Q2VPK5 515 aaKnown RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 MRGPRX2Q96LB1 330 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SLC9A7Q96T83 725 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 OSMRQ99650 979 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 NDEL1Q9GZM8 345 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 ABCB10Q9NRK6 738 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 U3KQV3 271 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 G3V2T6 193 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 MOCS2O96007 188 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CYBBP04839 570 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 UMPSP11172 480 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 PRDX3P30048 256 aaKnown RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 BCL2A1Q16548 175 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 INTS6LQ5JSJ4 861 aaKnown RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SAPCD2Q86UD0 394 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 PHYKPLQ8IUZ5 450 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 FAM86B1Q8N7N1 296 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CHDHQ8NE62 594 aaPredicted RBP14.59□□□□□ -0.07
COL6A2-202ENST00000310645 CALML6Q8TD86 181 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 NODALQ96S42 347 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 SLC39A8Q9C0K1 460 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 FAM118AQ9NWS6 357 aa14.59□□□□□ -0.07
COL6A2-202ENST00000310645 PARP14Q460N5 1801 aa14.58□□□□□ -0.07
COL6A2-202ENST00000310645 HS6ST1O60243 411 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 SLC22A3O75751 556 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 BMP4P12644 408 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 LEPRP48357 1165 aaKnown RBP14.58□□□□□ -0.08
COL6A2-202ENST00000310645 SELENBP1Q13228 472 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 SELPLGQ14242 412 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 OR4D1Q15615 310 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 SLC27A1Q6PCB7 646 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 SCML4Q8N228 414 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 GOLM1Q8NBJ4 401 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 LEMD2Q8NC56 503 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 ALOXE3Q9BYJ1 711 aa14.58□□□□□ -0.08
COL6A2-202ENST00000310645 MIR1-1HGQ9H1L0 117 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms