RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GET4Q7L5D6 327 aaPredicted RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 TSPAN33Q86UF1 283 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 SLC22A9Q8IVM8 553 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 LSMEM2Q8N112 164 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 RHEBL1Q8TAI7 183 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 STON2Q8WXE9 905 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 SORCS1Q8WY21 1168 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 KCNJ9Q92806 393 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 GPR21Q99679 349 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 FAM83CQ9BQN1 747 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 HEPHQ9BQS7 1158 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 DERL2Q9GZP9 239 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 ILKAPQ9H0C8 392 aaPredicted RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 TFB2MQ9H5Q4 396 aaKnown RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 ALG9Q9H6U8 611 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 IL26Q9NPH9 171 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 FNDC3AQ9Y2H6 1198 aaKnown RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 PCDHB1Q9Y5F3 818 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 TECTAO75443 2155 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 GLYATL1P3A0A0U1RQE8 302 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 CFAP73A6NFT4 308 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 NEMP2A6NFY4 417 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 TMEM221A6NGB7 291 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 AGAP14A8MT82 685 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 TTC34A8MYJ7 566 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 H3BQ06 376 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-205ENST00000307859 M0R296 226 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 FCHO1O14526 889 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 PRMT5O14744 637 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-205ENST00000307859 GPR39O43194 453 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 NIPSNAP2O75323 286 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 VPS26AO75436 327 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 T-ENOLP0DO92 83 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 LHCGRP22888 699 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 PPARGP37231 505 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-205ENST00000307859 NUBP1P53384 320 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 ATP6V0D1P61421 351 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 PDGFRLQ15198 375 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 GPR33Q49SQ1 333 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 ARL13AQ5H913 290 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-205ENST00000307859 LYPLAL1Q5VWZ2 237 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 LRRC66Q68CR7 880 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 SYCE2Q6PIF2 218 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 BRAT1Q6PJG6 821 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 PAQR3Q6TCH7 311 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 TAS2R42Q7RTR8 314 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 SERPINA9Q86WD7 417 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 FBXL6Q8N531 539 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 CD200R1Q8TD46 325 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 SGF29Q96ES7 293 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-205ENST00000307859 CNDP1Q96KN2 507 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 KLHL32Q96NJ5 620 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 TMEM237Q96Q45 408 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 ATOH8Q96SQ7 321 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 EBF4Q9BQW3 602 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 OSBPL1AQ9BXW6 950 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 NMUR2Q9GZQ4 415 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 EBF3Q9H4W6 596 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 BRD9Q9H8M2 597 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 NCKIPSDQ9NZQ3 722 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 MUTYHQ9UIF7 546 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 SLC8A2Q9UPR5 921 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.79□□□□□ -0.52
TRIM40-205ENST00000307859 CKAP5Q14008 2032 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 CACNA1HO95180 2353 aa11.79□□□□□ -0.52
TRIM40-205ENST00000307859 CCDC189A1A4V9 331 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 H3BMM5 538 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CCDC22O60826 627 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SERPINA6P08185 405 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 MPSTP25325 297 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CA5AP35218 305 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 KCNC1P48547 511 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 IDH3AP50213 366 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 POLR2LP62875 67 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 HYAL1Q12794 435 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 KRT72Q14CN4 511 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 OR4D1Q15615 310 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CHRNA6Q15825 494 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ZDHHC20Q5W0Z9 365 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ANKRD54Q6NXT1 300 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TTC7BQ86TV6 843 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 C10orf67Q8IYJ2 551 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 RBFAQ8N0V3 343 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 NKAPQ8N5F7 415 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 GIMAP7Q8NHV1 300 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 KIAA1191Q96A73 305 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 L3HYPDHQ96EM0 354 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 MOCOSQ96EN8 888 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 LRIG1Q96JA1 1093 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ZFYVE19Q96K21 471 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TTC1Q99614 292 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CIPCQ9C0C6 399 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 NSUN3Q9H649 340 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms