RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ZNF487B1APH4 448 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 C9IYK1 514 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 CAPN1P07384 714 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 GJA9P57773 515 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 SP3Q02447 781 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 IRF8Q02556 426 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 SLC10A7Q0GE19 358 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TAF10Q12962 218 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 MRPL28Q13084 256 aaKnown RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ZBED5Q49AG3 693 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 STEAP4Q687X5 459 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 KBTBD6Q86V97 674 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 OR13C4Q8NGS5 318 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 OR6K2Q8NGY2 324 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 OR10A6Q8NH74 314 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ZFP28Q8NHY6 868 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 NUAK2Q9H093 628 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 EURLQ9NYK6 297 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 AP3M1Q9Y2T2 418 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ARL5AQ9Y689 179 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 A0A1B0GVG6 124 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 SDHDO14521 159 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 RFXANKO14593 260 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TOR1BO14657 336 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 UROSP10746 265 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 UGT1A6P19224 532 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TMEM135Q86UB9 458 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 OTUB1Q96FW1 271 aaPredicted RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 PANX1Q96RD7 426 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 KIFC1Q9BW19 673 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 CIDEBQ9UHD4 219 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 IRAK2O43187 625 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 HTRA2O43464 458 aaPredicted RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 NOBOXO60393 691 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TYMPP19971 482 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 CYP2A7P20853 494 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 IL4RP24394 825 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ALDH4A1P30038 563 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 GRK4P32298 578 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 HCAR3P49019 387 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 PPP1R8Q12972 351 aaKnown RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 CBX3Q13185 183 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 STARD3Q14849 445 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TIGD5Q53EQ6 642 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 OGFRL1Q5TC84 451 aaPredicted RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 OGFOD2Q6N063 350 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 PAGE2Q7Z2X7 111 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 CPNE9Q8IYJ1 553 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 MUC13Q9H3R2 512 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 IPPKQ9H8X2 491 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 SNX8Q9Y5X2 465 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 CCDC162PA2VCL2 907 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 PAQR3Q6TCH7 311 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 AMER2Q8N7J2 671 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 HPS1Q92902 700 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TMEM169Q96HH4 297 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ACBD6Q9BR61 282 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
DDX54-201ENST00000306014 TRIM8Q9BZR9 551 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 COQ6Q9Y2Z9 468 aa13.2□□□□□ -0.3
DDX54-201ENST00000306014 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 BEST1O76090 585 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 SLC35E2BP0CK96 405 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 HSPA7P48741 367 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 DET1Q7L5Y6 550 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 ERMP1Q7Z2K6 904 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 MTERF3Q96E29 417 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 A0A0G2JLL6 359 aaPredicted RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 ELOVL7A1L3X0 281 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 PRMT5O14744 637 aaPredicted RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 PRKCGP05129 697 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 IQCF3P0C7M6 154 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 KRT20P35900 424 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 ENTPD1P49961 510 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 CARTPTQ16568 116 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 RFX4Q33E94 735 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 PRRT2Q7Z6L0 340 aaPredicted RBP13.19□□□□□ -0.3
DDX54-201ENST00000306014 KLHL23Q8NBE8 558 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
DDX54-201ENST00000306014 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms