RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TRMOQ9BU70 441 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 BOCQ9BWV1 1114 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 VPS9D1Q9Y2B5 631 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PRSS21Q9Y6M0 314 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CXorf51AA0A1B0GTR3 108 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 TRPC5OSA6NMA1 111 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 C5orf67F2Z3F1 127 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 KRT36O76013 467 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ESR1P03372 595 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 UGT1A6P19224 532 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 UGT1A1P22309 533 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 UGT1A4P22310 534 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 DDX6P26196 483 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP47-201ENST00000305481 UGT1A3P35503 534 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 UGT1A5P35504 534 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 MAPK8P45983 427 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 INHBCP55103 352 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ATP6V0D1P61421 351 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 NFATC2Q13469 925 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CBX2Q14781 532 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 PREPLQ4J6C6 727 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 C22orf39Q6P5X5 142 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 PSRC1Q6PGN9 363 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 CRTC1Q6UUV9 634 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 GRASPQ7Z6J2 395 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 SERPINA9Q86WD7 417 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ISG20Q96AZ6 181 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 ZNF707Q96C28 371 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 C3orf30Q96M34 536 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 LYSMD1Q96S90 227 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 BBS2Q9BXC9 721 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ZBTB26Q9HCK0 441 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SPHK2Q9NRA0 654 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SZT2Q5T011 3432 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 TRBV5-4A0A0C4DH59 114 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 RGSL1A5PLK6 1076 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 BTN3A1O00481 513 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 BNIP3LO60238 219 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 KLK8O60259 260 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 VPS26AO75436 327 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 PYGLP06737 847 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 FGF4P08620 206 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 TYRP14679 529 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CHRM3P20309 590 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SERPINA4P29622 427 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 AGTR2P50052 363 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SATB1Q01826 763 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CUL3Q13618 768 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 AARS2Q5JTZ9 985 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 LY6G5CQ5SRR4 150 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ICE2Q659A1 982 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 DPY19L3Q6ZPD9 716 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 RFLNAQ6ZTI6 216 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 METTL3Q86U44 580 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 SNX32Q86XE0 403 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CPNE9Q8IYJ1 553 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 NKAPQ8N5F7 415 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 CLDN19Q8N6F1 224 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 EFCAB3Q8N7B9 438 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CHST14Q8NCH0 376 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 GPR26Q8NDV2 337 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CEP70Q8NHQ1 597 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 LKAAEAR1Q8TD35 194 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ACTRT2Q8TDY3 377 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 LINGO1Q96FE5 620 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SCRN2Q96FV2 425 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 RTKNQ9BST9 563 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 DCLRE1BQ9H816 532 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 TRMT6Q9UJA5 497 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 RNF112Q9ULX5 631 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 PPIL1Q9Y3C6 166 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ASB1Q9Y576 335 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 DNAJC15Q9Y5T4 150 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 PTGDR2Q9Y5Y4 395 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 WNT6Q9Y6F9 365 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SLC30A1Q9Y6M5 507 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ZNF106Q9H2Y7 1883 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 GRXCR1A8MXD5 290 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SUPT3HB4E1H0 165 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 PRMT5O14744 637 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 SLC22A2O15244 555 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SUPT3HO75486 399 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 FGF19O95750 216 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 THRAP10827 490 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 PABPC1P11940 636 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 GFAPP14136 432 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CEBPBP17676 345 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 LHCGRP22888 699 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 EEF1DP29692 281 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 HOXA9P31269 272 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ERFP50548 548 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CCNHP51946 323 aaPredicted RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 IL2P60568 153 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 ACTR3P61158 418 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SNRPD1P62314 119 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 PTSQ03393 145 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 CHRNA6Q15825 494 aa6.49□□□□□ -1.37
USP47-201ENST00000305481 SWT1Q5T5J6 900 aaKnown RBP6.49□□□□□ -1.37
USP47-201ENST00000305481 FAM109BQ6ICB4 259 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms