RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 RGS10O43665 173 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 NOL4O94818 638 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 OAZ2O95190 189 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 CATP04040 527 aaKnown RBP12.3□□□□□ -0.44
ABCA3-201ENST00000301732 THRBP10828 461 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 POLR2JP52435 117 aaKnown RBP12.3□□□□□ -0.44
ABCA3-201ENST00000301732 ATXN1P54253 815 aaKnown RBP12.3□□□□□ -0.44
ABCA3-201ENST00000301732 CHAF1BQ13112 559 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 MEA1Q16626 185 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 RNASEH2BQ5TBB1 312 aaKnown RBP12.3□□□□□ -0.44
ABCA3-201ENST00000301732 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 OR10H4Q8NGA5 316 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 PCDHB18PQ96TA0 734 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 LMAN2LQ9H0V9 348 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
ABCA3-201ENST00000301732 MYOCOSA0A1B0GUC4 107 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 AIREO43918 545 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 E2F2Q14209 437 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 P2RY11Q96G91 374 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 KCNC2Q96PR1 638 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 EBF4Q9BQW3 602 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 NANSQ9NR45 359 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ABCC3O15438 1527 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 MATN4O95460 622 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 CYP2A6P11509 494 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 GABRB2P47870 512 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ALDH3A2P51648 485 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ARHGDIBP52566 201 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ECT2LQ008S8 904 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 DDR1Q08345 913 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 SLC10A7Q0GE19 358 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 SPATC1Q76KD6 591 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 TRABD2AQ86V40 505 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 DEPDC4Q8N2C3 294 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 TWIST2Q8WVJ9 160 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 KLK6Q92876 244 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ZNF780BQ9Y6R6 833 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 CBFA2T3O75081 653 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 BMP10O95393 424 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 DHFRP00374 187 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 HDCP19113 662 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 AHCYP23526 432 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ZNF132P52740 706 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 IRF9Q00978 393 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 LIPEQ05469 1076 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 SLC6A15Q9H2J7 730 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 CHMP1AQ9HD42 196 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 FBXO5Q9UKT4 447 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 TLR5O60602 858 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 BPGMP07738 259 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 CD40LGP29965 261 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 LIN52Q52LA3 116 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 SERPINA13PQ6UXR4 307 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 MTIF3Q9H2K0 278 aaKnown RBP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 CUEDC1Q9NWM3 386 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 GGA2Q9UJY4 613 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 NEDD8-MDP1E9PL57 170 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 DIRAS1O95057 198 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 GIMD1P0DJR0 217 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 TLX1P31314 330 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 ZNF135P52742 658 aaPredicted RBP12.29□□□□□ -0.44
ABCA3-201ENST00000301732 TGFB2P61812 414 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 HYAL2Q12891 473 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 BNIP3Q12983 259 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 MYBPC3Q14896 1274 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 IL23RQ5VWK5 629 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 IQCHQ86VS3 1027 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 C5orf34Q96MH7 638 aa12.29□□□□□ -0.44
ABCA3-201ENST00000301732 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 CYP1A2P05177 515 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 ALOX5P09917 674 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 C2orf80Q0P641 193 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 SF1Q15637 639 aaKnown RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 FSCN1Q16658 493 aaKnown RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 IRAK1BP1Q5VVH5 260 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 TMEM198Q66K66 360 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 AFTPHQ6ULP2 937 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 ELOA2Q8IYF1 753 aaPredicted RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 RERGQ96A58 199 aaPredicted RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 WDR12Q9GZL7 423 aaKnown RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 CXorf21Q9HAI6 301 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 TMEM39AQ9NV64 488 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 TVP23BQ9NYZ1 205 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 UMODL1Q5DID0 1318 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 MLYCDO95822 493 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 C2P06681 752 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 NOS2P35228 1153 aa12.28□□□□□ -0.44
ABCA3-201ENST00000301732 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
ABCA3-201ENST00000301732 ZNF143P52747 638 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms