RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 A0A1W2PNU3 283 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 MAGEB16A2A368 324 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 SDR42E2A6NKP2 422 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 A6NNZ2 444 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 GOLGA8KD6RF30 607 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 H3BM21 787 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 H3BQF6 201 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 KPNA3O00505 521 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 PCDH8O95206 1070 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 EPOP01588 193 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 IVLP07476 585 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 MLLT3P42568 568 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 ITKQ08881 620 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 ZNF844Q08AG5 666 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 CDKN3Q16667 212 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 FNBP1LQ5T0N5 605 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 RBM44Q6ZP01 1051 aaKnown RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 Q6ZSR6 202 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 EFL1Q7Z2Z2 1120 aaKnown RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 PTAR1Q7Z6K3 402 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 SLC22A18ASQ8N1D0 253 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 OXNAD1Q96HP4 312 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 FSD1LQ9BXM9 530 aa20.98■□□□□ 0.95
SMCO4-201ENST00000298966 ROPN1BQ9BZX4 212 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 ROPN1Q9HAT0 212 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 COL27A1Q8IZC6 1860 aaPredicted RBP20.98■□□□□ 0.95
SMCO4-201ENST00000298966 CDRT15L2A8MXV6 281 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 CPP00450 1065 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 CA4P22748 312 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 CSNK1DP48730 415 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 SERPINH1P50454 418 aaKnown RBP20.97■□□□□ 0.95
SMCO4-201ENST00000298966 IFFO1Q0D2I5 559 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 CLN3Q13286 438 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 KYNUQ16719 465 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 PALM2Q8IXS6 379 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 SH2D3CQ8N5H7 860 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 ZNF548Q8NEK5 533 aaPredicted RBP20.97■□□□□ 0.95
SMCO4-201ENST00000298966 WDR36Q8NI36 951 aaKnown RBP20.97■□□□□ 0.95
SMCO4-201ENST00000298966 ISG20Q96AZ6 181 aaKnown RBP20.97■□□□□ 0.95
SMCO4-201ENST00000298966 ARRDC3Q96B67 414 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 PRR11Q96HE9 360 aaPredicted RBP20.97■□□□□ 0.95
SMCO4-201ENST00000298966 NUDCD1Q96RS6 583 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 TBL1YQ9BQ87 522 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 TRIM4Q9C037 500 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 IL22Q9GZX6 179 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 ARNT2Q9HBZ2 717 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 WDR70Q9NW82 654 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 FETUBQ9UGM5 382 aa20.97■□□□□ 0.95
SMCO4-201ENST00000298966 ANKRD36A6QL64 1941 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 UBR5O95071 2799 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-201ENST00000298966 GOLGA6L10A6NI86 522 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 TMCC1O94876 653 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 CR2P20023 1033 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 ADRA1AP35348 466 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 CYTH1Q15438 398 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 CEP85LQ5SZL2 805 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 GUSBP11Q6P575 273 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 KDELC1Q6UW63 502 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 DNAAF3Q8N9W5 541 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 FBXO36Q8NEA4 188 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 ARRDC2Q8TBH0 407 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 PTCD2Q8WV60 388 aaKnown RBP20.96■□□□□ 0.95
SMCO4-201ENST00000298966 FEM1CQ96JP0 617 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 SIGLEC10Q96LC7 697 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 C9orf72Q96LT7 481 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 CCNL2Q96S94 520 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-201ENST00000298966 EBNA1BP2Q99848 306 aaKnown RBP20.96■□□□□ 0.95
SMCO4-201ENST00000298966 SEMA3CQ99985 751 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 CEP44Q9C0F1 390 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 ZFR2Q9UPR6 939 aaKnown RBP20.96■□□□□ 0.95
SMCO4-201ENST00000298966 HS3ST2Q9Y278 367 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 HS3ST3A1Q9Y663 406 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 CSNK1G3Q9Y6M4 447 aa20.96■□□□□ 0.95
SMCO4-201ENST00000298966 TLN1Q9Y490 2541 aaKnown RBP20.95■□□□□ 0.94
SMCO4-201ENST00000298966 EME2A4GXA9 379 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-201ENST00000298966 INSIG1O15503 277 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 SNAP91O60641 907 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 TCEA3O75764 348 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 TNFSF15O95150 251 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 CTSLP07711 333 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 MYZAPP0CAP1 466 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 NME1P15531 152 aaKnown RBP20.95■□□□□ 0.94
SMCO4-201ENST00000298966 HLA-DPA1P20036 260 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 OAS2P29728 719 aaKnown RBP20.95■□□□□ 0.94
SMCO4-201ENST00000298966 ELK3P41970 407 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 AP1S1P61966 158 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 LAMB3Q13751 1172 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 MSS51Q4VC12 460 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 C6orf132Q5T0Z8 1188 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 SEL1L3Q68CR1 1132 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 ZNF449Q6P9G9 518 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 CRTC1Q6UUV9 634 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 XKR5Q6UX68 686 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 RANBP10Q6VN20 620 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 CYS1Q717R9 158 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 CLEC14AQ86T13 490 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 PGBD5Q8N414 524 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 TMIEQ8NEW7 156 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 STAMBPL1Q96FJ0 436 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 SAMD15Q9P1V8 674 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms