RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 DCLRE1AQ6PJP8 1040 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 ANKRD13BQ86YJ7 626 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TTC30BQ8N4P2 665 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 CDYL2Q8N8U2 506 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 C2CD4AQ8NCU7 369 aaPredicted RBP11.35□□□□□ -0.59
TRUB1-201ENST00000298746 CSF3RQ99062 836 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 TRIM54Q9BYV2 358 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 GMIPQ9P107 970 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 AASSQ9UDR5 926 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 POLG2Q9UHN1 485 aa11.35□□□□□ -0.59
TRUB1-201ENST00000298746 RAD51BO15315 384 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 CD4P01730 458 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 FMO3P31513 532 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 NEK2P51955 445 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 HERVK_113P63132 956 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 KCNAB2Q13303 367 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 OXA1LQ15070 435 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ZNF362Q5T0B9 420 aaPredicted RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SCML4Q8N228 414 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 MCOLN3Q8TDD5 553 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ITCHQ96J02 903 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SNX27Q96L92 541 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 C11orf84Q9BUA3 381 aaPredicted RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ERVK-6Q9BXR3 956 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 PRKD2Q9BZL6 878 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SCN3BQ9NY72 215 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 MPP6Q9NZW5 540 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 FBXW11Q9UKB1 542 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 A0A1W2PP18 115 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 C1RP00736 705 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ANXA6P08133 673 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 INHBBP09529 407 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 CRHBPP24387 322 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 CD86P42081 329 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SLC26A2P50443 739 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SERPINH1P50454 418 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ST13P50502 369 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 COPZ1P61923 177 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 AQP6Q13520 282 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 LRRC52Q8N7C0 313 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 MCFD2Q8NI22 146 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 NDNFQ8TB73 568 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 TMEM125Q96AQ2 219 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ZHX1-C8orf76Q96EF9 292 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 DUS3LQ96G46 650 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 C12orf42Q96LP6 360 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 KLHL5Q96PQ7 755 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 DOK1Q99704 481 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 MROQ9BYG7 248 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 REXO4Q9GZR2 422 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 NUP214P35658 2090 aaPredicted RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ZNF99A8MXY4 864 aaPredicted RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 KATNA1O75449 491 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SEC14L2O76054 403 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 ANGPTL1O95841 491 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 DBTP11182 482 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 MAP2K4P45985 399 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 GALNT2Q10471 571 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 PRKG2Q13237 762 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 LAPTM4AQ15012 233 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 NR6A1Q15406 480 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SV2CQ496J9 727 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 SGO1Q5FBB7 561 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 NOL9Q5SY16 702 aaKnown RBP11.34□□□□□ -0.59
TRUB1-201ENST00000298746 LRRC8DQ7L1W4 858 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 P2RY8Q86VZ1 359 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 CNIH3Q8TBE1 160 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 GDAP2Q9NXN4 497 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 CD274Q9NZQ7 290 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 C3orf18Q9UK00 162 aa11.34□□□□□ -0.59
TRUB1-201ENST00000298746 QSER1Q2KHR3 1735 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 AHDC1Q5TGY3 1603 aaPredicted RBP11.33□□□□□ -0.6
TRUB1-201ENST00000298746 H0YAE9 185 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 FXYD1O00168 92 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 TAF4O00268 1085 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 CNTN5O94779 1100 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 F9P00740 461 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 LGALS2P05162 132 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 POLD2P49005 469 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 DGKQP52824 942 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 CDKN2DP55273 166 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 CD47Q08722 323 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
TRUB1-201ENST00000298746 DEPDC1Q5TB30 811 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 KIAA0930Q6ICG6 404 aaPredicted RBP11.33□□□□□ -0.6
TRUB1-201ENST00000298746 SLC27A1Q6PCB7 646 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 BLOC1S3Q6QNY0 202 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 KIAA0408Q6ZU52 694 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 EID3Q8N140 333 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 TBATAQ96M53 351 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 IL12RB2Q99665 862 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 HGH1Q9BTY7 390 aa11.33□□□□□ -0.6
TRUB1-201ENST00000298746 GPN2Q9H9Y4 310 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms