RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZNF155Q12901 538 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 NBPF12Q5TAG4 269 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 GHDCQ8N2G8 530 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CADM2Q8N3J6 435 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ZNF527Q8NB42 609 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 KIAA0895Q8NCT3 520 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 MGME1Q9BQP7 344 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CHIAQ9BZP6 476 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PLCL2Q9UPR0 1127 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 MEMO1Q9Y316 297 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 GAKO14976 1311 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 FAM205AQ6ZU69 1335 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PROCP04070 461 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PCCBP05166 539 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 MLLT6P55198 1093 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCF11-201ENST00000298281 NDUFA9Q16795 377 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 EML3Q32P44 896 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 NT5DC1Q5TFE4 455 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 GET4Q7L5D6 327 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 C12orf66Q96MD2 445 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 MRM3Q9HC36 420 aaKnown RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 SPAG4Q9NPE6 437 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ZNF510Q9Y2H8 683 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 KCNE2Q9Y6J6 123 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 LRATO95237 230 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 LHCGRP22888 699 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 VARSP26640 1264 aaKnown RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 GRM3Q14832 879 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 RFTN2Q52LD8 501 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 FOXRED2Q8IWF2 684 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CMTR2Q8IYT2 770 aaKnown RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 ARL10Q8N8L6 244 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 OR2L2Q8NH16 312 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PORCNQ9H237 461 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 OSER1Q9NX31 292 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CHD4Q14839 1912 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 A0A087X0B3 334 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 E5RJQ4 531 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ASGR1P07306 291 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 GNSP15586 552 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 TMEM199Q8N511 208 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 SLC38A3Q99624 504 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ULBP1Q9BZM6 244 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CUEDC1Q9NWM3 386 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 ABCA6Q8N139 1617 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 HSPA12AO43301 675 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 UGT2B17O75795 530 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PRKCHP24723 683 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 DDX6P26196 483 aaKnown RBP eCLIP12.01□□□□□ -0.492e-19■□□□□ 10
PCF11-201ENST00000298281 CASP6P55212 293 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 MAZP56270 477 aaKnown RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 AP3S2P59780 193 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CYP4F8P98187 520 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 PERM1Q5SV97 790 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 TRIM43Q96BQ3 446 aaPredicted RBP12.01□□□□□ -0.49
PCF11-201ENST00000298281 MTMR8Q96EF0 704 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CERS2Q96G23 380 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 CCDC120Q96HB5 630 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 ABCG8Q9H221 673 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
PCF11-201ENST00000298281 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
PCF11-201ENST00000298281 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
PCF11-201ENST00000298281 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
PCF11-201ENST00000298281 FFAR3O14843 346 aa12□□□□□ -0.49
PCF11-201ENST00000298281 GPR42O15529 346 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ADSSP30520 456 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CBX2Q14781 532 aaPredicted RBP12□□□□□ -0.49
PCF11-201ENST00000298281 ANXA8L1Q5VT79 327 aa12□□□□□ -0.49
PCF11-201ENST00000298281 TMPRSS9Q7Z410 1059 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CCNB1IP1Q9NPC3 277 aa12□□□□□ -0.49
PCF11-201ENST00000298281 RAB21Q9UL25 225 aa12□□□□□ -0.49
PCF11-201ENST00000298281 KELP23276 732 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CFL1P23528 166 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
PCF11-201ENST00000298281 BICRALQ6AI39 1079 aa12□□□□□ -0.49
PCF11-201ENST00000298281 SLC35C1Q96A29 364 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CEP152O94986 1710 aa12□□□□□ -0.49
PCF11-201ENST00000298281 PPEF2O14830 753 aa12□□□□□ -0.49
PCF11-201ENST00000298281 IL1AP01583 271 aa12□□□□□ -0.49
PCF11-201ENST00000298281 RBL1P28749 1068 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ZNF143P52747 638 aaPredicted RBP12□□□□□ -0.49
PCF11-201ENST00000298281 ADARP55265 1226 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 SMARCB1Q12824 385 aa12□□□□□ -0.49
PCF11-201ENST00000298281 C9orf64Q5T6V5 341 aa12□□□□□ -0.49
PCF11-201ENST00000298281 SLC2A7Q6PXP3 512 aa12□□□□□ -0.49
PCF11-201ENST00000298281 TMPRSS11AQ6ZMR5 421 aa12□□□□□ -0.49
PCF11-201ENST00000298281 NET1Q7Z628 596 aaPredicted RBP12□□□□□ -0.49
PCF11-201ENST00000298281 HJURPQ8NCD3 748 aaPredicted RBP12□□□□□ -0.49
PCF11-201ENST00000298281 SIRPGQ9P1W8 387 aa12□□□□□ -0.49
PCF11-201ENST00000298281 STOX2Q9P2F5 926 aaPredicted RBP12□□□□□ -0.49
PCF11-201ENST00000298281 COLEC10Q9Y6Z7 277 aa12□□□□□ -0.49
PCF11-201ENST00000298281 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ZNF726A6NNF4 738 aa12□□□□□ -0.49
PCF11-201ENST00000298281 INMTO95050 263 aa12□□□□□ -0.49
PCF11-201ENST00000298281 CSTBP04080 98 aaKnown RBP12□□□□□ -0.49
PCF11-201ENST00000298281 CYP3A4P08684 503 aa12□□□□□ -0.49
PCF11-201ENST00000298281 ABHD2P08910 425 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms