RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 AP2M1Q96CW1 435 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 CCDC97Q96F63 343 aaPredicted RBP24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 ASB2Q96Q27 587 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 SLC13A1Q9BZW2 595 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 FZD4Q9ULV1 537 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 IGLV3-16A0A075B6K0 115 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 UBA6A0AVT1 1052 aaPredicted RBP24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 FADS2P1A8MWK0 482 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 COPEO14579 308 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 SAT1P21673 171 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 CD9P21926 228 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 FDXRP22570 491 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 CRABP2P29373 138 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 ITIH4Q14624 930 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 AGERQ15109 404 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 CTSL3PQ5NE16 218 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 KBTBD6Q86V97 674 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 RBFAQ8N0V3 343 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 FOXQ1Q9C009 403 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 ZDHHC3Q9NYG2 299 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 DCDC2Q9UHG0 476 aa24.43■■□□□ 1.5
GTF2A1-201ENST00000298173 DOCK9Q9BZ29 2069 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 NUMA1Q14980 2115 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 TCRBV21S2A2A0A5A6 115 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 PRMT5O14744 637 aaPredicted RBP24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 TM9SF1O15321 606 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 PHGDHO43175 533 aaKnown RBP24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 LZTS3O60299 673 aaPredicted RBP24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 ESR1P03372 595 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 PKMP14618 531 aaKnown RBP24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 ZNF7P17097 686 aaPredicted RBP24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 DGKEP52429 567 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 UBXN2BQ14CS0 331 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 INSCQ1MX18 579 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 ZNF284Q2VY69 593 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 TTC31Q49AM3 519 aaPredicted RBP24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 VPS35Q96QK1 796 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 BOCQ9BWV1 1114 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 CD320Q9NPF0 282 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 PLLPQ9Y342 182 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 COMMD10Q9Y6G5 202 aa24.42■■□□□ 1.5
GTF2A1-201ENST00000298173 ZWINTO95229 277 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 SOD1P00441 154 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 GMPRP36959 345 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 MDH1P40925 334 aaKnown RBP24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 WDR4P57081 412 aaKnown RBP24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 SETMARQ53H47 684 aaPredicted RBP24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 PLD6Q8N2A8 252 aaKnown RBP24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 NUS1Q96E22 293 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 TSPAN17Q96FV3 270 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 C1QTNF1Q9BXJ1 281 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 VPS11Q9H270 941 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 PCDHB1Q9Y5F3 818 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 PIKFYVEQ9Y2I7 2098 aa24.41■■□□□ 1.5
GTF2A1-201ENST00000298173 IGLON5A6NGN9 336 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ATG13O75143 517 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 PCDH8O95206 1070 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 TOP3BO95985 862 aaKnown RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ETV4P43268 484 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ADPRHP54922 357 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 SLC12A2P55011 1212 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 B4GALNT1Q00973 533 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 SFSWAPQ12872 951 aaKnown RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ZNF460Q14592 562 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 PELI3Q8N2H9 469 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ANKRD42Q8N9B4 389 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 GANCQ8TET4 914 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 BTN2A2Q8WVV5 523 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 CENPTQ96BT3 561 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 C12orf65Q9H3J6 166 aaKnown RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 POLMQ9NP87 494 aaPredicted RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 C2orf42Q9NWW7 574 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 KCTD5Q9NXV2 234 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 NKIRAS1Q9NYS0 192 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 SLC17A7Q9P2U7 560 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 TLK1Q9UKI8 766 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ZFR2Q9UPR6 939 aaKnown RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ANKRD6Q9Y2G4 727 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ACOT9Q9Y305 439 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 TM7SF2O76062 418 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 GSTA1P08263 222 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 COL6A2P12110 1019 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 CBX1P83916 185 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 IRF9Q00978 393 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 GPRC6AQ5T6X5 926 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 TMEM207Q6UWW9 146 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 TRIM67Q6ZTA4 783 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 RAPH1Q70E73 1250 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 GJD3Q8N144 294 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 OR14C36Q8NHC7 312 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 CLDN23Q96B33 292 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 COPS8Q99627 209 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 OSBPL6Q9BZF3 934 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 CCDC68Q9H2F9 335 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 POPDC3Q9HBV1 291 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 ITM2CQ9NQX7 267 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 INTS9Q9NV88 658 aaKnown RBP24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 EBF1Q9UH73 591 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 MUTYHQ9UIF7 546 aa24.4■■□□□ 1.5
GTF2A1-201ENST00000298173 GRID1Q9ULK0 1009 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms