RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GIPC2Q8TF65 315 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 SLC8A2Q9UPR5 921 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 BBIP1A8MTZ0 92 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 ACOX3O15254 700 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 CYBBP04839 570 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 IL12AP29459 219 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 KCNK10P57789 538 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 SLC2A7Q6PXP3 512 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 LGI2Q8N0V4 545 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 EFHBQ8N7U6 833 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 OR52B6Q8NGF0 335 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 SNRNP27Q8WVK2 155 aaKnown RBP24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 BTN2A3PQ96KV6 586 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 NAA50Q9GZZ1 169 aaKnown RBP24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 ACTR3BQ9P1U1 418 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 HCSTQ9UBK5 93 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 EIF2B4Q9UI10 523 aaKnown RBP24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 PCDHGC4Q9Y5F7 938 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 IL10RBQ08334 325 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 ADRM1Q16186 407 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 ANKS6Q68DC2 871 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 GPR141Q7Z602 305 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 DCP1BQ8IZD4 617 aaKnown RBP24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 C2orf69Q8N8R5 385 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 MDGA1Q8NFP4 955 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 STAG3L4Q8TBR4 150 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 FUBP1Q96AE4 644 aaKnown RBP24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 ZUFSPQ96AP4 578 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 MYRFLQ96LU7 910 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 HGH1Q9BTY7 390 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 CCDC68Q9H2F9 335 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 GID8Q9NWU2 228 aa24.22■■□□□ 1.47
SPTSSA-201ENST00000298130 CLOCKO15516 846 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 DUSP11O75319 330 aaKnown RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 OR4F21O95013 312 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 C1RP00736 705 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 PENKP01210 267 aaPredicted RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 PBX3P40426 434 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 CCT8P50990 548 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 PSAPL1Q6NUJ1 521 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 RPF2Q9H7B2 306 aaKnown RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 THEGQ9P2T0 379 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 TDRD15B5MCY1 1934 aaKnown RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 PTPRDP23468 1912 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 NDUFS3O75489 264 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 SLC26A3P40879 764 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 ENTPD1P49961 510 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 ADARP55265 1226 aaKnown RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 NRG1Q02297 640 aaPredicted RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 DSC3Q14574 896 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 TMEM214Q6NUQ4 689 aaKnown RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 TADA1Q96BN2 335 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 ISOC1Q96CN7 298 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 TFB2MQ9H5Q4 396 aaKnown RBP24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 MRGBPQ9NV56 204 aa24.21■■□□□ 1.47
SPTSSA-201ENST00000298130 AQP12BA6NM10 295 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 KERAO60938 352 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 ASGR1P07306 291 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 SERPINF2P08697 491 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 HSD17B1P14061 328 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 ZFP36L2P47974 494 aaKnown RBP24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 HK3P52790 923 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 OR4D2P58180 307 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 PMS2P3Q13401 168 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 GPR107Q5VW38 600 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 LCN8Q6JVE9 175 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 EGFL6Q8IUX8 553 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 AQP12AQ8IXF9 295 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 EEF1AKMT1Q8WVE0 214 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 KIAA1191Q96A73 305 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 C12orf43Q96C57 262 aaKnown RBP24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 CENPNQ96H22 339 aaPredicted RBP24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 PPM1MQ96MI6 270 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 RNF145Q96MT1 663 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 PCDHB8Q9UN66 801 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 FADS3Q9Y5Q0 445 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 DOCK4Q8N1I0 1966 aa24.2■■□□□ 1.47
SPTSSA-201ENST00000298130 CCDC154A6NI56 674 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 FAM155AB1AL88 458 aaPredicted RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 FGF1P05230 155 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 IDO1P14902 403 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 VARSP26640 1264 aaKnown RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 CLCN2P51788 898 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 RPS24P62847 133 aaKnown RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 DCTN2Q13561 401 aaKnown RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 VARS2Q5ST30 1063 aaKnown RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 GLT6D1Q7Z4J2 308 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 RTN4RL1Q86UN2 441 aaPredicted RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 ERI1Q8IV48 349 aaKnown RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 FNDC5Q8NAU1 212 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 ARHGAP39Q9C0H5 1083 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 LTB4R2Q9NPC1 389 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 TAS2R13Q9NYV9 303 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 COL4A4P53420 1690 aaPredicted RBP24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 A0A1W2PP18 115 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 BMP1P13497 986 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 MTPNP58546 118 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 SELPLGQ14242 412 aa24.2■■□□□ 1.46
SPTSSA-201ENST00000298130 NEDD8Q15843 81 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms