RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PSMD13Q9UNM6 376 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 A0A0J9YYE9 177 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 HGFP14210 728 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 GRIA2P42262 883 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 XIAPP98170 497 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 SMARCB1Q12824 385 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 TLR1Q15399 786 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 GABPB2Q8TAK5 448 aaPredicted RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 PLD4Q96BZ4 506 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 SERPINI1Q99574 410 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 SLAMF8Q9P0V8 285 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 USP22Q9UPT9 525 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 DTNAQ9Y4J8 743 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 PRSS21Q9Y6M0 314 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 PIKFYVEQ9Y2I7 2098 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 A0A1B0GTW7 788 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 NRP2O60462 931 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 KERAO60938 352 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 BCAS2O75934 225 aaPredicted RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 SOD2P04179 222 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 ACRP10323 421 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 PKMP14618 531 aaKnown RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 CTSOP43234 321 aaPredicted RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 STK19P49842 368 aaPredicted RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 CDKL1Q00532 357 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 NFKB2Q00653 900 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 FOLH1Q04609 750 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 OGFRL1Q5TC84 451 aaPredicted RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 RFLNAQ6ZTI6 216 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 ZSWIM9Q86XI8 627 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 ALG14Q96F25 216 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 MYRFLQ96LU7 910 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 TFB2MQ9H5Q4 396 aaKnown RBP11.69□□□□□ -0.54
RHO-201ENST00000296271 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 UBAP1Q9NZ09 502 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 EGFL7Q9UHF1 273 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 OR51B4Q9Y5P0 310 aa11.69□□□□□ -0.54
RHO-201ENST00000296271 CHD9Q3L8U1 2897 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 LCHNA4D1U4 455 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 HOXA2O43364 376 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 FKTNO75072 461 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 OR4F21O95013 312 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 CXCL10P02778 98 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 SLC26A3P40879 764 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PIK3CGP48736 1102 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 CCNHP51946 323 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 RAD51Q06609 339 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 ZRSR2Q15696 482 aaKnown RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 C6orf10Q5SRN2 563 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 C6orf52Q5T4I8 152 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 KANK2Q63ZY3 851 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 GAREM2Q75VX8 874 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 SETD3Q86TU7 594 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 TSPAN33Q86UF1 283 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 BBS7Q8IWZ6 715 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PDZD8Q8NEN9 1154 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 STAG3L4Q8TBR4 150 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 LRTOMTQ8WZ04 291 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 INTS10Q9NVR2 710 aaKnown RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 ATP11BQ9Y2G3 1177 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 OAS3Q9Y6K5 1087 aaKnown RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 SZT2Q5T011 3432 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 MAGEA13PA6NCF6 341 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 KRT87PA6NCN2 255 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 TRIM38O00635 465 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 GAPDHSO14556 408 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 CASQ2O14958 399 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 TRIM24O15164 1050 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 SLC22A2O15244 555 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 TEX28O15482 410 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 CLDN7O95471 211 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 GUCA1CO95843 209 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 UQCRBP14927 111 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 NELFEP18615 380 aaKnown RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 ARL1P40616 181 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 HTR6P50406 440 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PLIN5Q00G26 463 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 GALNT1Q10472 559 aaPredicted RBP11.68□□□□□ -0.54
RHO-201ENST00000296271 CDH18Q13634 790 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 NRF1Q16656 503 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 CDYL2Q8N8U2 506 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 RHEBL1Q8TAI7 183 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 DDI1Q8WTU0 396 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PPP2R3CQ969Q6 453 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 TMEM169Q96HH4 297 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 GPR63Q9BZJ6 419 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 DERL2Q9GZP9 239 aa11.68□□□□□ -0.54
RHO-201ENST00000296271 PIF1Q9H611 641 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms