RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SNX6Q9UNH7 406 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 AGPSO00116 658 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 FAM163BP0C2L3 166 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 PRKAR1AP10644 381 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF12P17014 697 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ITGB6P18564 788 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 BICRALQ6AI39 1079 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRIM48Q8IWZ4 208 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CAPN10Q9HC96 672 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 PNPOQ9NVS9 261 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CDH22Q9UJ99 828 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 DYRK3O43781 588 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ENDOD1O94919 500 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 FGF19O95750 216 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CKMP06732 381 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ANXA5P08758 320 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 YWHAQP27348 245 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CRADDP78560 199 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CRY1Q16526 586 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 UPP1Q16831 310 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 VARS2Q5ST30 1063 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 GCNT7Q6ZNI0 430 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 MTSS1LQ765P7 747 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 C2orf15Q8WU43 125 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 KLHL32Q96NJ5 620 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 QRFPRQ96P65 431 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 MECRQ9BV79 373 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 FBXO5Q9UKT4 447 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 DOLKQ9UPQ8 538 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZBTB14O43829 449 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 LYPLA1O75608 230 aaPredicted RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ERBB2P04626 1255 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ADRB2P07550 413 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ADSLP30566 484 aaPredicted RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ATP6V0D1P61421 351 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 TCEAL5Q5H9L2 206 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 TXNDC11Q6PKC3 985 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 UCMAQ8WVF2 138 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 BHMTQ93088 406 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ELMO3Q96BJ8 720 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 FBXL18Q96ME1 805 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ARL15Q9NXU5 204 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 SSR3Q9UNL2 185 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 SAMHD1Q9Y3Z3 626 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 RFXAPO00287 272 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 IFRD1O00458 451 aaPredicted RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 BTN3A3O00478 584 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 DDX3YO15523 660 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ULK1O75385 1050 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 BANF1O75531 89 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 NR2F6P10588 404 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CAPGP40121 348 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 IRF8Q02556 426 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC1A5Q15758 541 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZACNQ401N2 412 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 C5orf22Q49AR2 442 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 PYDC2Q56P42 97 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 SPPL2BQ8TCT7 592 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 TKTL2Q9H0I9 626 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 PRO3102Q9H379 93 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 SFXN1Q9H9B4 322 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRNAU1APQ9NX07 287 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 VPS51Q9UID3 782 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 BACE2Q9Y5Z0 518 aa11.79□□□□□ -0.52
SYNGAP1-201ENST00000293748 CCNKO75909 580 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR6B1O95007 311 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 PRDX6P30041 224 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 LILRA4P59901 499 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 CBX3Q13185 183 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 PAGE2BQ5JRK9 111 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 LIN54Q6MZP7 749 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 PIGWQ7Z7B1 504 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 HPS6Q86YV9 775 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 PGAM4Q8N0Y7 254 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 MRPL43Q8N983 215 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 SMG7Q92540 1137 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 MED8Q96G25 268 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 CD207Q9UJ71 328 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 CATP04040 527 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 NFKB1P19838 968 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 RPL3P39023 403 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 RPS6KA3P51812 740 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 TAS2R40P59535 323 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 USP4Q13107 963 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 BOP1Q14137 746 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 TYSND1Q2T9J0 566 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZFP69Q49AA0 526 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 HGSNATQ68CP4 663 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 CRTC3Q6UUV7 619 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 GPRIN3Q6ZVF9 776 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 PAGE2Q7Z2X7 111 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
SYNGAP1-201ENST00000293748 TDRPQ86YL5 185 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms