RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MBD2Q9UBB5 411 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 NFS1Q9Y697 457 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 IL1BP01584 269 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ANXA6P08133 673 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 PTGS2P35354 604 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 RPL7AP62424 266 aaKnown RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 KIAA0408Q6ZU52 694 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CMC1Q7Z7K0 106 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 PGAM4Q8N0Y7 254 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 LRRC17Q8N6Y2 441 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ACTRT2Q8TDY3 377 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 SP140LQ9H930 580 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 TBCCD1Q9NVR7 557 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A1W2PRU2 124 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 KCNA5P22460 613 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 GDI1P31150 447 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 PLET1Q6UQ28 207 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 TDRPQ86YL5 185 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 NAT16Q8N8M0 369 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 GRPEL2Q8TAA5 225 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CERS2Q96G23 380 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ACOX2Q99424 681 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 SYTL2Q9HCH5 934 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 AASDHPPTQ9NRN7 309 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF224Q9NZL3 707 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 A6NHS1 94 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 C9IYK1 514 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ACSL4O60488 711 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 GABBR2O75899 941 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 RECQL5O94762 991 aaPredicted RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CTSEP14091 401 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CYP4F8P98187 520 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ECT2LQ008S8 904 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 SOWAHAQ2M3V2 549 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 INO80DQ53TQ3 878 aaPredicted RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 WDR36Q8NI36 951 aaKnown RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 TPD52L3Q96J77 140 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 MIR1-1HGQ9H1L0 117 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ZDHHC4Q9NPG8 344 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF222Q9UK12 451 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 SAGE2PA6NJ88 616 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 PMM2O15305 246 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 VPS26AO75436 327 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CST1P01037 141 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MPSTP25325 297 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MAGEA11P43364 429 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 PYDC2Q56P42 97 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CHST9Q7L1S5 443 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 PIWIL4Q7Z3Z4 852 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MRPL10Q7Z7H8 261 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 FBXO39Q8N4B4 442 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 LRRC20Q8TCA0 184 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ACDQ96AP0 544 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 C8orf48Q96LL4 319 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ADI1Q9BV57 179 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 REEP1Q9H902 201 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 INVSQ9Y283 1065 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SCAMP3O14828 347 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 KIAA0355O15063 1070 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 HNRNPLP14866 589 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 HTR1BP28222 390 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ALDH4A1P30038 563 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MAGEA10P43363 369 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 DGKGP49619 791 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CAP1Q01518 475 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 LSAMPQ13449 338 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SFT2D3Q587I9 215 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 THAP5Q7Z6K1 395 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CACUL1Q86Y37 369 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MYH7P12883 1935 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM95CA0A1B0GW59 222 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 IFRD1O00458 451 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MYL12BO14950 172 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 TBX1O43435 398 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 NDUFB5O43674 189 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MTA2O94776 668 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 PRLP01236 227 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 TSPAN8P19075 237 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CRHR1P34998 444 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ADCK2Q7Z695 626 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 TBC1D21Q8IYX1 336 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC4A11Q8NBS3 891 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms