RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MOB2Q70IA6 237 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 CENPNQ96H22 339 aaPredicted RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 ZCCHC2Q9C0B9 1178 aaKnown RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 SGK2Q9HBY8 427 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 ELOVL7A1L3X0 281 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 H3BSA7 217 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 SLC25A14O95258 325 aaPredicted RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 IL1R2P27930 398 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 HSPA7P48741 367 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 CNPPD1Q9BV87 410 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 CCNB1IP1Q9NPC3 277 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 SAMD4AQ9UPU9 718 aaKnown RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 TMEM233B4DJY2 109 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 E9PAM4 449 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 GUCY1B2O75343 617 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 CD52P31358 61 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 DLG1Q12959 904 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 TRIM32Q13049 653 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 C5orf22Q49AR2 442 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 C6orf183Q5T699 404 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 C15orf52Q6ZUT6 534 aaKnown RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 POMGNT2Q8NAT1 580 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 PCDH19Q8TAB3 1148 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 CERKQ8TCT0 537 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 EEF1AKMT1Q8WVE0 214 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 SLC39A3Q9BRY0 314 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 LIN28AQ9H9Z2 209 aaKnown RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 TCAF1Q9Y4C2 921 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 B4GALT4O60513 344 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 ERAL1O75616 437 aaKnown RBP15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 OR4F21O95013 312 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 TRBC1P01850 177 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 CCNYL3P0C7X3 344 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 MAPKAPK2P49137 400 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 THOP1P52888 689 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 LRP10Q7Z4F1 713 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 C11orf16Q9NQ32 467 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 RAB23Q9ULC3 237 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 MAP4K5Q9Y4K4 846 aa15.25■□□□□ 0.03
SHROOM4-201ENST00000289292 TTC24A2A3L6 582 aaPredicted RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GUCA1AP43080 201 aaPredicted RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PSEN1P49768 467 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 MAP1SQ66K74 1059 aaPredicted RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 FBXL19Q6PCT2 694 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 NAT8LQ8N9F0 302 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 ZNF516Q92618 1163 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GPATCH1Q9BRR8 931 aaKnown RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 SP140LQ9H930 580 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GBA2Q9HCG7 927 aaPredicted RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 NKIRAS2Q9NYR9 191 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 NID2Q14112 1375 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GOT2P00505 430 aaKnown RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 SERPINA1P01009 418 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 FGF1P05230 155 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 MYL9P24844 172 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 CASP9P55211 416 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 TAS2R41P59536 307 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 AHI1Q8N157 1196 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 RAD51AP1Q96B01 352 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 CLIP3Q96DZ5 547 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GFM1Q96RP9 751 aaKnown RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 TCF25Q9BQ70 676 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PDZD7Q9H5P4 517 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 SYNPO2Q9UMS6 1093 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 MATN2O00339 956 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 DYRK3O43781 588 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PGK1P00558 417 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 MYCLP1P12525 358 aaPredicted RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 MSS51Q4VC12 460 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 LINGO4Q6UY18 593 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 RASSF6Q6ZTQ3 369 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 RAB43Q86YS6 212 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 ATP13A3Q9H7F0 1226 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 NDOR1Q9UHB4 597 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 EIF2B4Q9UI10 523 aaKnown RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 FAM25EA8MYX2 175 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 NT5C1B-RDH14C9J2C7 533 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 H3BNX3 289 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GPR25O00155 361 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 OR5F1O95221 314 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 ACADMP11310 421 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 CHRNA4P43681 627 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 ASPAP45381 313 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 STARP49675 285 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 ACLYP53396 1101 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 P2RY8Q86VZ1 359 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 GTPBP3Q969Y2 492 aaKnown RBP15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PPCDCQ96CD2 204 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 ART5Q96L15 291 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 FCRL4Q96PJ5 515 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 OR52B2Q96RD2 323 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PREBQ9HCU5 417 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 FZD10Q9ULW2 581 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 PCDHA2Q9Y5H9 948 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 SQORQ9Y6N5 450 aa15.24■□□□□ 0.03
SHROOM4-201ENST00000289292 XRCC1P18887 633 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms