RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 VPS35Q96QK1 796 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 IPPKQ9H8X2 491 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 HMGXB4Q9UGU5 601 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 PCDHGB3Q9Y5G1 929 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 PARP4Q9UKK3 1724 aaKnown RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SLC35G6P0C7Q6 338 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SIAH1Q8IUQ4 282 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF516Q92618 1163 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 FBXL18Q96ME1 805 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 GRIP2Q9C0E4 1043 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SEMA6AQ9H2E6 1030 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SUCOQ9UBS9 1254 aaKnown RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 SLC28A2O43868 658 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 CCNYL3P0C7X3 344 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 MPP1Q00013 466 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 BNIP2Q12982 314 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 CELF5Q8N6W0 485 aaKnown RBP18.42■□□□□ 0.54
PCDH1-201ENST00000287008 MOSPD2Q8NHP6 518 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 TDP1Q9NUW8 608 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 C3orf18Q9UK00 162 aa18.42■□□□□ 0.54
PCDH1-201ENST00000287008 TRIM38O00635 465 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 TSPAN19P0C672 248 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 ARMCX4Q5H9R4 360 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 FUKQ8N0W3 1084 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 LRRC57Q8N9N7 239 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SMYD1Q8NB12 490 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 TEPSINQ96N21 525 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 CDH19Q9H159 772 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 NUDT4Q9NZJ9 180 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 PSMD13Q9UNM6 376 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 ILVBLA1L0T0 632 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 CLDN9O95484 217 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 GOT2P00505 430 aaKnown RBP18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SERPINA6P08185 405 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 CRHR1P34998 444 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 C16orf72Q14CZ0 275 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 TMEM110Q86TL2 294 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 ULK2Q8IYT8 1036 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 BPIFB1Q8TDL5 484 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 HMGB4Q8WW32 186 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 RHOBTB2Q9BYZ6 727 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 PAPOLBQ9NRJ5 636 aaKnown RBP18.41■□□□□ 0.54
PCDH1-201ENST00000287008 FGF18O76093 207 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 HSPA7P48741 367 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 TNK2Q07912 1038 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 PYDC1Q8WXC3 89 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 KLK6Q92876 244 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 RCN3Q96D15 328 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 DTNBP1Q96EV8 351 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 FNDC11Q9BVV2 318 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SERHL2Q9H4I8 314 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SUV39H2Q9H5I1 410 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SERHLQ9NQF3 203 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 PLLPQ9Y342 182 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 MON2Q7Z3U7 1717 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 ENO4A6NNW6 628 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 FBXL22Q6P050 247 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 LPCAT2Q7L5N7 544 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 MAGEE2Q8TD90 523 aaPredicted RBP18.41■□□□□ 0.54
PCDH1-201ENST00000287008 KCTD13Q8WZ19 329 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SHDQ96IW2 340 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 CCSER2Q9H7U1 834 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 PNPOQ9NVS9 261 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 SLC17A7Q9P2U7 560 aa18.41■□□□□ 0.54
PCDH1-201ENST00000287008 C9IYK1 514 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 DNM1LO00429 736 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 HADHBP55084 474 aaKnown RBP18.4■□□□□ 0.54
PCDH1-201ENST00000287008 KRR1Q13601 381 aaKnown RBP18.4■□□□□ 0.54
PCDH1-201ENST00000287008 TRIM16LQ309B1 348 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 DHDDSQ86SQ9 333 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 SLC38A2Q96QD8 506 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 BRINP2Q9C0B6 783 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 MFHAS1Q9Y4C4 1052 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 ATP6V1G2O95670 118 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 ACTR1BP42025 376 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 ACTR1AP61163 376 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 TRIM71Q2Q1W2 868 aaKnown RBP18.4■□□□□ 0.54
PCDH1-201ENST00000287008 LDLRAP1Q5SW96 308 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 RNF43Q68DV7 783 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 GDAP2Q9NXN4 497 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 PACSIN3Q9UKS6 424 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 MYRFQ9Y2G1 1151 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 PPEF2O14830 753 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 OGNP20774 298 aaKnown RBP18.4■□□□□ 0.54
PCDH1-201ENST00000287008 LAPTM5Q13571 262 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 TAF1AQ15573 450 aaPredicted RBP18.4■□□□□ 0.54
PCDH1-201ENST00000287008 LRRC74BQ6ZQY2 392 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 ARHGAP36Q6ZRI8 547 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 DDHD1Q8NEL9 900 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 ZNF599Q96NL3 588 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 LRCH1Q9Y2L9 728 aa18.4■□□□□ 0.54
PCDH1-201ENST00000287008 DYTNA2CJ06 578 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 OR10H3O60404 316 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 SLC10A3P09131 477 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 ADH5P11766 374 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 TIE1P35590 1138 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 CA9Q16790 459 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.54
PCDH1-201ENST00000287008 CLHC1Q8NHS4 586 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms