RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 HSPA8P11142 646 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 AGKQ53H12 422 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 C6orf10Q5SRN2 563 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF554Q86TJ5 538 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 TRIM74Q86UV6 250 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 TRIM73Q86UV7 250 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 PACRGLQ8N7B6 248 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 BLOC1S5Q8TDH9 187 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ABTB1Q969K4 478 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 TADA1Q96BN2 335 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 CCDC126Q96EE4 140 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 TRMT2BQ96GJ1 504 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 RANBP9Q96S59 729 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 OMDQ99983 421 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 NOL11Q9H8H0 719 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 IL21Q9HBE4 155 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ARMC1Q9NVT9 282 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 PTBP2Q9UKA9 531 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 FAF1Q9UNN5 650 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ARL5AQ9Y689 179 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 SRP72O76094 671 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 RHOCP08134 193 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ESRRGP62508 458 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 RALGDSQ12967 914 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ACBD5Q5T8D3 534 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 NEPROQ6NW34 567 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 C8orf82Q6P1X6 216 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 TCEAL8Q8IYN2 117 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 HS6ST3Q8IZP7 471 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 ADAMTS19Q8TE59 1207 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 TFAP2CQ92754 450 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 CEP295NLQ96MC4 621 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 PPP1R2P1Q96PQ5 205 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 MAGEH1Q9H213 219 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 DUS2Q9NX74 493 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 CROTQ9UKG9 612 aa18.22■□□□□ 0.51
PDLIM3-201ENST00000284767 KIAA1671Q9BY89 1806 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 A0A087WXM4 84 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 TGM5O43548 720 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 SNAP91O60641 907 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 F11P03951 625 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 EPHB3P54753 998 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 RBM20Q5T481 1227 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 KIAA0930Q6ICG6 404 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 CXorf57Q6NSI4 855 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 GPR141Q7Z602 305 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 DHFR2Q86XF0 187 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 OSBPL6Q9BZF3 934 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 CXXC1Q9P0U4 656 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 LOC285095A0A1B0GVY8 99 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 MRASO14807 208 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 OXCT1P55809 520 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 ZNF177Q13360 481 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 RNF219Q5W0B1 726 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 FBXO46Q6PJ61 603 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 CCDC117Q8IWD4 279 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 TNIP2Q8NFZ5 429 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 GRIN3AQ8TCU5 1115 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 WFDC5Q8TCV5 224 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 ADAMTS16Q8TE57 1224 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 PPWD1Q96BP3 646 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 TCF12Q99081 682 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 LIN28AQ9H9Z2 209 aaKnown RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 CCDC167Q9P0B6 97 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 FBXO5Q9UKT4 447 aa18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 MTF2Q9Y483 593 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-201ENST00000284767 LILRB3O75022 631 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 CLDN11O75508 207 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 LINC00271P0C7V0 271 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 HNRNPLP14866 589 aaKnown RBP eCLIP18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 NELFEP18615 380 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 MZF1P28698 734 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 TNK2Q07912 1038 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 PTPRRQ15256 657 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 ZBED5Q49AG3 693 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 CYP2R1Q6VVX0 501 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 GAREM2Q75VX8 874 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 ERMP1Q7Z2K6 904 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 CARNMT1Q8N4J0 409 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 MFSD2AQ8NA29 543 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 FAM47BQ8NA70 645 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 OR6P1Q8NGX9 317 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 PTCD2Q8WV60 388 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 HEXDCQ8WVB3 486 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 HDAC10Q969S8 669 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 MUC3BQ9H195 1237 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 UBA2Q9UBT2 640 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 CPQQ9Y646 472 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 SH3PXD2BA1X283 911 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 LDB2O43679 373 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 NRP2O60462 931 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 GPC4O75487 556 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 C1RP00736 705 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 GABRR2P28476 465 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 POU4F1Q01851 419 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 PRKCQQ04759 706 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 TMEM199Q8N511 208 aa18.2■□□□□ 0.5
PDLIM3-201ENST00000284767 C2CD4AQ8NCU7 369 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms