RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 JUNP05412 331 aaKnown RBP20.82■□□□□ 0.92
YBX3-202ENST00000279550 HNRNPLP14866 589 aaKnown RBP eCLIP20.82■□□□□ 0.92
YBX3-202ENST00000279550 CA5AP35218 305 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 PDAP1Q13442 181 aaKnown RBP20.82■□□□□ 0.92
YBX3-202ENST00000279550 SNCBQ16143 134 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 CDKN3Q16667 212 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 ITPRIPL2Q3MIP1 535 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 CTSL3PQ5NE16 218 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 GRAMD4Q6IC98 578 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 PAQR3Q6TCH7 311 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 PIWIL4Q7Z3Z4 852 aaKnown RBP20.82■□□□□ 0.92
YBX3-202ENST00000279550 KDM1BQ8NB78 822 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 FAM13CQ8NE31 585 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 ISG20Q96AZ6 181 aaKnown RBP20.82■□□□□ 0.92
YBX3-202ENST00000279550 CIPCQ9C0C6 399 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 WDR55Q9H6Y2 383 aaPredicted RBP20.82■□□□□ 0.92
YBX3-202ENST00000279550 BRD9Q9H8M2 597 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 TNFRSF12AQ9NP84 129 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 BAIAP2L1Q9UHR4 511 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 ERVW-1Q9UQF0 538 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 FAM50BQ9Y247 325 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 GOLGA8QA0A0J9YX86 632 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 A0A0J9YYE9 177 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 GOLGA8OA6NCC3 632 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 GOLGA8NF8WBI6 632 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 GAPDHSO14556 408 aaPredicted RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 HDAC3O15379 428 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 TRBC1P01850 177 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 AOC1P19801 751 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 HNF1BP35680 557 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 OPRD1P41143 372 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 RPL26P61254 145 aaKnown RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 FAM219BQ5XKK7 198 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 C22orf39Q6P5X5 142 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 OR2AP1Q8NGE2 309 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 CYB5D2Q8WUJ1 264 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 SORCS1Q8WY21 1168 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 EXT2Q93063 718 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 PHF21BQ96EK2 531 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 CHFRQ96EP1 664 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 CCDC97Q96F63 343 aaPredicted RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 PPP1R36Q96LQ0 422 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 GPR21Q99679 349 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 SLCO3A1Q9UIG8 710 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 RPL26L1Q9UNX3 145 aaKnown RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 PKP3Q9Y446 797 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 E9PBE3 544 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 NEMP1O14524 444 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 GSC2O15499 205 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 KLHL41O60662 606 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 SOCS5O75159 536 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 NIPSNAP2O75323 286 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 PKMP14618 531 aaKnown RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 HMGCLP35914 325 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 MAPK8P45983 427 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 KDSRQ06136 332 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 TBCCQ15814 346 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 SEL1L3Q68CR1 1132 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 NAIF1Q69YI7 327 aaPredicted RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 TAS2R42Q7RTR8 314 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 PHTF2Q8N3S3 785 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 TEX9Q8N6V9 391 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 CNDP1Q96KN2 507 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 PHF7Q9BWX1 381 aaPredicted RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 CEP44Q9C0F1 390 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 ATP13A3Q9H7F0 1226 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 SORCS3Q9UPU3 1222 aa20.81■□□□□ 0.92
YBX3-202ENST00000279550 OAS3Q9Y6K5 1087 aaKnown RBP20.81■□□□□ 0.92
YBX3-202ENST00000279550 SCN8AQ9UQD0 1980 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 B2RBV5 119 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 PRRT4C9JH25 899 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 ASLP04424 464 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 NCF2P19878 526 aaPredicted RBP20.8■□□□□ 0.92
YBX3-202ENST00000279550 EIF2DP41214 584 aaKnown RBP20.8■□□□□ 0.92
YBX3-202ENST00000279550 TTPAP49638 278 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 SEMG2Q02383 582 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 AAK1Q2M2I8 961 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 MYLK3Q32MK0 819 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 ACCSLQ4AC99 568 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 TERB1Q8NA31 727 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 NXPE3Q969Y0 559 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 CCDC126Q96EE4 140 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 MRGPRX3Q96LB0 322 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 NUF2Q9BZD4 464 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 CCDC68Q9H2F9 335 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 GSTO2Q9H4Y5 243 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 ELOVL2Q9NXB9 296 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 TAS2R13Q9NYV9 303 aa20.8■□□□□ 0.92
YBX3-202ENST00000279550 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.8■□□□□ 0.92
YBX3-202ENST00000279550 C1orf232A0A0U1RR37 186 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 F8W8V4 182 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 SPECC1L-ADORA2AF8WAN1 911 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 GYG2O15488 501 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 BNIP3LO60238 219 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 CLDN7O95471 211 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 VASPP50552 380 aaPredicted RBP20.79■□□□□ 0.92
YBX3-202ENST00000279550 HK2P52789 917 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 SNRPD1P62314 119 aaKnown RBP20.79■□□□□ 0.92
YBX3-202ENST00000279550 CACNG1Q06432 222 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 EIF4HQ15056 248 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms