RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SEPT7Q16181 437 aaKnown RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 CYP1B1Q16678 543 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 C6orf132Q5T0Z8 1188 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 GPRC6AQ5T6X5 926 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 N4BP2L1Q5TBK1 243 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 DENND5AQ6IQ26 1287 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 DHRS13Q6UX07 377 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 ERMP1Q7Z2K6 904 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 EFL1Q7Z2Z2 1120 aaKnown RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 KANSL1Q7Z3B3 1105 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CBARPQ8N350 705 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 ARL10Q8N8L6 244 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 KYQ8NBH2 561 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CCL4L1Q8NHW4 92 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 ZNF398Q8TD17 642 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.47□□□□□ -1.37
CD44-204ENST00000279452 COX14Q96I36 57 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 TBATAQ96M53 351 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 PHF12Q96QT6 1004 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 KRT12Q99456 494 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 TRIM31Q9BZY9 425 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CLPBQ9H078 707 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 ABCG4Q9H172 646 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 TRIM39Q9HCM9 518 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 IL26Q9NPH9 171 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 EIF2B3Q9NR50 452 aaKnown RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 NCKIPSDQ9NZQ3 722 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 BFARQ9NZS9 450 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 SAMD15Q9P1V8 674 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 VPS18Q9P253 973 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 ATXN10Q9UBB4 475 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 NFKBIL1Q9UBC1 381 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 KCNK6Q9Y257 313 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 SLC17A4Q9Y2C5 497 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 DNAJC16Q9Y2G8 782 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 PLEKHM1Q9Y4G2 1056 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CSNK1G3Q9Y6M4 447 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 DGKBQ9Y6T7 804 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 SPAG17Q6Q759 2223 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 MYO15AQ9UKN7 3530 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 RALGAPA1Q6GYQ0 2036 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 TRBV23OR9-2A0A075B6M9 112 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TCRBV7S3A2A0A539 114 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 MED19A0JLT2 244 aaPredicted RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 OR51F1A6NGY5 319 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 PDZK1P1A8MUH7 402 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CFAP99D6REC4 459 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CCDC188H7C350 402 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TPP1O14773 563 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 LDB2O43679 373 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 HYAL3O43820 417 aaPredicted RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 VEGFDO43915 354 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 SUN1O94901 812 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 IVLP07476 585 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 VCLP18206 1134 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 SPINK2P20155 84 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TPSB2P20231 275 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 MGAT1P26572 445 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 ACADVLP49748 655 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CKAP4Q07065 602 aaKnown RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 C2orf54Q08AI8 447 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TMEM115Q12893 351 aaPredicted RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 NFATC2Q13469 925 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 PEX6Q13608 980 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 LRP8Q14114 963 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TPSAB1Q15661 275 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 SKIDA1Q1XH10 827 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 PROX2Q3B8N5 592 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 PYCR3Q53H96 274 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 LDLRAP1Q5SW96 308 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 FNBP1LQ5T0N5 605 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 ANKRD22Q5VYY1 191 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 IZUMO3Q5VZ72 239 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 GUSBP11Q6P575 273 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 DBX2Q6ZNG2 339 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 MICALCLQ6ZW33 695 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 ADGRG6Q86SQ4 1221 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 LRRTM4Q86VH4 590 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 NLRP8Q86W28 1048 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CREG2Q8IUH2 290 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 PPIL6Q8IXY8 311 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 SLC35F3Q8IY50 421 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CHCHD4Q8N4Q1 142 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 Q8N9G6 341 aaPredicted RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 OR6P1Q8NGX9 317 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 BAHD1Q8TBE0 780 aaPredicted RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 IFI44Q8TCB0 444 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 MAPK15Q8TD08 544 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 ZDHHC1Q8WTX9 485 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 STYXQ8WUJ0 223 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 NAT14Q8WUY8 206 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CPT1BQ92523 772 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TMEM131Q92545 1883 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 ULK4Q96C45 1275 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 RUNDC3BQ96NL0 473 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 DCBLD2Q96PD2 775 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 VPS35Q96QK1 796 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TRIM51Q9BSJ1 452 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 STN1Q9H668 368 aaKnown RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 RMI1Q9H9A7 625 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms