RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MPP6Q9NZW5 540 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 BAG5Q9UL15 447 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 RIMKLBQ9ULI2 386 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 NFU1Q9UMS0 254 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 NENFQ9UMX5 172 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 MTMR6Q9Y217 621 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 PLEKHM1Q9Y4G2 1056 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 LIPGQ9Y5X9 500 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TEX264Q9Y6I9 313 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 V9GYY5 206 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 LRRC37AA6NMS7 1700 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 LTBP1Q14766 1721 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 COL4A1P02462 1669 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CACNA1SQ13698 1873 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 A0A1B0GWJ7 208 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 DENND3A2RUS2 1198 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 NCF1BA6NI72 391 aaPredicted RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 NCF1CA8MVU1 366 aaPredicted RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 FOXO6A8MYZ6 492 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 UBE2Q2LH0YL09 131 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CCDC188H7C350 402 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 H7C4K7 107 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 MYO1CO00159 1063 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 PPEF2O14830 753 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 SMAD6O43541 496 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 BUB1O43683 1085 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 NUDT21O43809 227 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 CCNT2O60583 730 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 ERLIN1O75477 346 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 AKAP3O75969 853 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 UNC5CO95185 931 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 KCNK5O95279 499 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 NPPAP01160 153 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CD1AP06126 327 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 TPM3P06753 285 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 AHCYP23526 432 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CCR1P32246 355 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 MC5RP33032 325 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CTXN1P60606 82 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CTAG1AP78358 180 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 GRSF1Q12849 480 aaKnown RBP eCLIP4.61□□□□□ -1.67
CD44-202ENST00000278385 MRPL49Q13405 166 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 MTX1Q13505 466 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 THOC5Q13769 683 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 GALNT3Q14435 633 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 KCNAB1Q14722 419 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 EFTUD2Q15029 972 aaKnown RBP eCLIP4.61□□□□□ -1.67
CD44-202ENST00000278385 HADHQ16836 314 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 MST1LQ2TV78 715 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 TBRG1Q3YBR2 411 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CFAP221Q4G0U5 840 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 PREPLQ4J6C6 727 aaPredicted RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 FILIP1LQ4L180 1135 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 LRRC23Q53EV4 343 aaPredicted RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 FBXO48Q5FWF7 155 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 RBM20Q5T481 1227 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 CLEC2AQ6UVW9 174 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 C15orf39Q6ZRI6 1047 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 KCTD9Q7L273 389 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 TRABD2AQ86V40 505 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 SPATA24Q86W54 205 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 RASAL3Q86YV0 1011 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 LRRC49Q8IUZ0 686 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 KDM8Q8N371 416 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 RASGEF1CQ8N431 466 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 LINC00469Q8N7U9 141 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 NHLRC2Q8NBF2 726 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CAMKVQ8NCB2 501 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 LPCAT1Q8NF37 534 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 OR8K3Q8NH51 312 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 ZFP28Q8NHY6 868 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 FRAT1Q92837 279 aaPredicted RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 TMEM186Q96B77 213 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 FAM149B1Q96BN6 582 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 PIWIL1Q96J94 861 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 FAM227BQ96M60 508 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 C5orf34Q96MH7 638 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CAMK1GQ96NX5 476 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 INTS14Q96SY0 518 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 MAP7D2Q96T17 732 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 MEIS3Q99687 375 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 GAL3ST1Q99999 423 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CCDC77Q9BR77 488 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 PIMREGQ9BSJ6 248 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 MECRQ9BV79 373 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 NUP85Q9BW27 656 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 FAM83DQ9H4H8 585 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 GORASP2Q9H8Y8 452 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 POLR1BQ9H9Y6 1135 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 BCO1Q9HAY6 547 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 RPRD1BQ9NQG5 326 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 CENPMQ9NSP4 180 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 ARHGEF38Q9NXL2 777 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 FBXL17Q9UF56 701 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 CLEC4AQ9UMR7 237 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 SUFUQ9UMX1 484 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 TDRKHQ9Y2W6 561 aaKnown RBP4.61□□□□□ -1.67
CD44-202ENST00000278385 ENTPD2Q9Y5L3 495 aa4.61□□□□□ -1.67
CD44-202ENST00000278385 MAST3O60307 1309 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms