RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 RUNX3Q13761 415 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 TRIM67Q6ZTA4 783 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 PAF1Q8N7H5 531 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 PPP2R3CQ969Q6 453 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 TMEM245Q9H330 911 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 ZDHHC2Q9UIJ5 367 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 APPL1Q9UKG1 709 aa12.02□□□□□ -0.48
SDE2-201ENST00000272091 HSPA4LO95757 839 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 RECQLP46063 649 aaPredicted RBP12.02□□□□□ -0.49
SDE2-201ENST00000272091 KLC3Q6P597 504 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 PARS2Q7L3T8 475 aaKnown RBP12.02□□□□□ -0.49
SDE2-201ENST00000272091 STK40Q8N2I9 435 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 TERB1Q8NA31 727 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 NMUR2Q9GZQ4 415 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 ZDHHC4Q9NPG8 344 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 CD84Q9UIB8 345 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 UPK3BL1B0FP48 263 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 UPK3BL2E5RIL1 263 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 CDC7O00311 574 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 IPO13O94829 963 aaKnown RBP12.02□□□□□ -0.49
SDE2-201ENST00000272091 LAMP2P13473 410 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 VIPR1P32241 457 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 IDH3AP50213 366 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 ZNF234Q14588 700 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 ATP13A5Q4VNC0 1218 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 CERS6Q6ZMG9 384 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 WDR75Q8IWA0 830 aaKnown RBP12.02□□□□□ -0.49
SDE2-201ENST00000272091 NXPE1Q8N323 547 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 CLDN19Q8N6F1 224 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 EEF1AKMT1Q8WVE0 214 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 ACTR5Q9H9F9 607 aaPredicted RBP12.02□□□□□ -0.49
SDE2-201ENST00000272091 THG1LQ9NWX6 298 aaKnown RBP12.02□□□□□ -0.49
SDE2-201ENST00000272091 DNAJC28Q9NX36 388 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 ZFP69BQ9UJL9 534 aa12.02□□□□□ -0.49
SDE2-201ENST00000272091 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 UBXN8O00124 270 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PRMT5O14744 637 aaPredicted RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 GRID2O43424 1007 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 NPHS1O60500 1241 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ITGALP20701 1170 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 NNMTP40261 264 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 NFKB2Q00653 900 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 AGR3Q8TD06 166 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ELSPBP1Q96BH3 223 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 GSTO2Q9H4Y5 243 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 TFB2MQ9H5Q4 396 aaKnown RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 NCKIPSDQ9NZQ3 722 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ITM2BQ9Y287 266 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 NPEPPSL1A6NEC2 478 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 LRRC14BA6NHZ5 514 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 VPS26AO75436 327 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 CBX6O95503 412 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 JUNP05412 331 aaKnown RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 PTPN5P54829 565 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 CPNE9Q8IYJ1 553 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 GBP7Q8N8V2 638 aaPredicted RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 RHEBL1Q8TAI7 183 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PPP4R1Q8TF05 950 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 KIAA1191Q96A73 305 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PBXIP1Q96AQ6 731 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 MSLNLQ96KJ4 702 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PLEKHG4BQ96PX9 1271 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 FAM129BQ96TA1 746 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ABCG8Q9H221 673 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 CCDC68Q9H2F9 335 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 FBRSL1Q9HCM7 1045 aaKnown RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 RAP2CQ9Y3L5 183 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 COMMD10Q9Y6G5 202 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 FCHO1O14526 889 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 TSNQ15631 228 aaKnown RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 HNRNPA1L2Q32P51 320 aaKnown RBP12.01□□□□□ -0.49
SDE2-201ENST00000272091 SPDYAQ5MJ70 313 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 CCNYL1Q8N7R7 359 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 L3HYPDHQ96EM0 354 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ACOX2Q99424 681 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ZNF576Q9H609 170 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 ARL8BQ9NVJ2 186 aa12.01□□□□□ -0.49
SDE2-201ENST00000272091 PIKFYVEQ9Y2I7 2098 aa12□□□□□ -0.49
SDE2-201ENST00000272091 TMEM233B4DJY2 109 aa12□□□□□ -0.49
SDE2-201ENST00000272091 UBFD1O14562 309 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 PSMC3P17980 439 aa12□□□□□ -0.49
SDE2-201ENST00000272091 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 MMP12P39900 470 aa12□□□□□ -0.49
SDE2-201ENST00000272091 SETDB1Q15047 1291 aa12□□□□□ -0.49
SDE2-201ENST00000272091 GPR33Q49SQ1 333 aa12□□□□□ -0.49
SDE2-201ENST00000272091 SLC9B1Q4ZJI4 515 aa12□□□□□ -0.49
SDE2-201ENST00000272091 FNDC3BQ53EP0 1204 aaKnown RBP12□□□□□ -0.49
SDE2-201ENST00000272091 UNC50Q53HI1 259 aa12□□□□□ -0.49
SDE2-201ENST00000272091 ATAT1Q5SQI0 421 aa12□□□□□ -0.49
SDE2-201ENST00000272091 ZNF678Q5SXM1 525 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms