RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HMGB4Q8WW32 186 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 AIF1LQ9BQI0 150 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 MMADHCQ9H3L0 296 aaPredicted RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 ELAC1Q9H777 363 aaKnown RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 IPPKQ9H8X2 491 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ZNF490Q9ULM2 529 aaPredicted RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 KLHL20Q9Y2M5 609 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 H3BN98 237 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 HS6ST1O60243 411 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 SLC1A2P43004 574 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 INTS11Q5TA45 600 aaKnown RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 GDPD4Q6W3E5 623 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 HID1Q8IV36 788 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 RCN3Q96D15 328 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 APOLD1Q96LR9 279 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 PRRG3Q9BZD7 231 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 GLI3P10071 1580 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 HK2P52789 917 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 BLVRAP53004 296 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 CST9Q5W186 159 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 GDPD5Q8WTR4 605 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 PIWIL1Q96J94 861 aaKnown RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 TMEM79Q9BSE2 394 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 SEMA6AQ9H2E6 1030 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 USE1Q9NZ43 259 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 AP3M1Q9Y2T2 418 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 OR10H1Q9Y4A9 318 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 TCRBV7S3A2A0A539 114 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A9O60656 530 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 TM7SF2O76062 418 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 BEST1O76090 585 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 SERPINA6P08185 405 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 CNPP09543 421 aaKnown RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 TYRP14679 529 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 IDO1P14902 403 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A6P19224 532 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A1P22309 533 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A4P22310 534 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A3P35503 534 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A5P35504 534 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 NSG1P42857 185 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 KPNB1Q14974 876 aaKnown RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 TIGD2Q4W5G0 525 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 OR2AP1Q8NGE2 309 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 OR52E6Q96RD3 313 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 OR2AG1Q9H205 316 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 NOL11Q9H8H0 719 aaKnown RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A7Q9HAW7 530 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A10Q9HAW8 530 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UGT1A8Q9HAW9 530 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 MFHAS1Q9Y4C4 1052 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 LEFTY2O00292 366 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 S100A5P33763 92 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 UBE3AQ05086 875 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
NPC1-201ENST00000269228 SLC22A17Q8WUG5 538 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 PYDC1Q8WXC3 89 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 NELL1Q92832 810 aa13.63□□□□□ -0.23
NPC1-201ENST00000269228 TK2O00142 265 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 OGNP20774 298 aaKnown RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 TM4SF4P48230 202 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 MRPS35P82673 323 aaKnown RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 TSNQ15631 228 aaKnown RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 LY6G5CQ5SRR4 150 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ZNF549Q6P9A3 640 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 AHI1Q8N157 1196 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 RP9Q8TA86 221 aaKnown RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 EBF3Q9H4W6 596 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 IL36AQ9UHA7 158 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ANAPC2Q9UJX6 822 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 FPGTO14772 594 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 UMPSP11172 480 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 GRIA3P42263 894 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 SLC34A1Q06495 639 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ACAP2Q15057 778 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 C1orf220Q5T0J3 134 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 COLEC10Q9Y6Z7 277 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 TRAFD1O14545 582 aaPredicted RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 ENO2P09104 434 aaPredicted RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 PIK3R1P27986 724 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 IRF5Q13568 498 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 R3HCC1LQ7Z5L2 792 aaKnown RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 GPR135Q8IZ08 494 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 SPOCK2Q92563 424 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 PEBP4Q96S96 227 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 NUDT4Q9NZJ9 180 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 CORO1CQ9ULV4 474 aaPredicted RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 NWD2Q9ULI1 1742 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 RFXANKO14593 260 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 SLC22A3O75751 556 aa13.62□□□□□ -0.23
NPC1-201ENST00000269228 RECQL5O94762 991 aaPredicted RBP13.62□□□□□ -0.23
NPC1-201ENST00000269228 UNC5CO95185 931 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms