RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PSD2Q9BQI7 771 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NMUR1Q9HB89 426 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MPP6Q9NZW5 540 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OAZ3Q9UMX2 235 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TRPC5OSA6NMA1 111 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SRP72O76094 671 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 AP2A1O95782 977 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CHEK2O96017 543 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 HPCAL1P37235 193 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TSPY1Q01534 308 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 USP10Q14694 798 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 INTS11Q5TA45 600 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 BTBD8Q5XKL5 378 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CNSTQ6PJW8 725 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TMEM135Q86UB9 458 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 THEM5Q8N1Q8 247 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZNF419Q96HQ0 510 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SUSD3Q96L08 255 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZNF641Q96N77 438 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PKMYT1Q99640 499 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MARCH5Q9NX47 278 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 BFARQ9NZS9 450 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IFT52Q9Y366 437 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TANC1Q9C0D5 1861 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ADAM12O43184 909 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PAGE1O75459 146 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IFITM2Q01629 132 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 VARS2Q5ST30 1063 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PPP2R2DQ66LE6 453 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 USP43Q70EL4 1123 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DSG4Q86SJ6 1040 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CRIPAKQ8N1N5 446 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PACRGLQ8N7B6 248 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GABPB2Q8TAK5 448 aaPredicted RBP15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CAPSLQ8WWF8 208 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 LRCH3Q96II8 777 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IL1RL2Q9HB29 575 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CCM2LQ9NUG4 571 aaPredicted RBP15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 EGFL7Q9UHF1 273 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TCAF1Q9Y4C2 921 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZBBXA8MT70 800 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NOTOA8MTQ0 251 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 M0QZQ0 153 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 UBDO15205 165 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 B4GAT1O43505 415 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 JRKO75564 520 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RSL1D1O76021 490 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MT-CO1P00395 513 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GALTP07902 379 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SNRPB2P08579 225 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DNAJB2P25686 324 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 AIF1P55008 147 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ANO4Q32M45 955 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TSTD2Q5T7W7 516 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RPS27LQ71UM5 84 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 BPIFB6Q8NFQ5 453 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ARMC5Q96C12 935 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CRISPLD1Q9H336 500 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ATXN3LQ9H3M9 355 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DKK3Q9UBP4 350 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SEPT3Q9UH03 358 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PCDHGA3Q9Y5H0 932 aa15.87■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TRANK1O15050 2925 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DYTNA2CJ06 578 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 EI24O14681 340 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GUCY1B2O75343 617 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 KRT75O95678 551 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CYP11A1P05108 521 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SLC35E2BP0CK96 405 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 HCAR3P49019 387 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 E2F2Q14209 437 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MAPRE2Q15555 327 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SCD5Q86SK9 330 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SPNS2Q8IVW8 549 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CMTR2Q8IYT2 770 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CENPLQ8N0S6 344 aaPredicted RBP15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 HDAC11Q96DB2 347 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FANCEQ9HB96 536 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TNFRSF12AQ9NP84 129 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OSER1Q9NX31 292 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DNMT3BQ9UBC3 853 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 VWA8A3KMH1 1905 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 A0A1W2PQH9 124 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DHRS12A0PJE2 317 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TARM1B6A8C7 271 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NRP2O60462 931 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 EIF2S1P05198 315 aaKnown RBP15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NMBRP28336 390 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PRKAA2P54646 552 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IFITM3Q01628 133 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SQLEQ14534 574 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PRPSAP1Q14558 356 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CARTPTQ16568 116 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 AGAP7PQ5VUJ5 663 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ITIH5Q86UX2 942 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NPAS4Q8IUM7 802 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SLC41A1Q8IVJ1 513 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IQCF2Q8IXL9 164 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms